Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
5
target gene predictions
3
accessible chromatin
1
chromatin state
1
variant allelic effects
0
differential activity
Annotation Category
5
Target gene links
Annotation type Category
5
ATAC-seq
2
DNase-seq
2
H3K27ac ChIP-Seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
cell line
Biosample term
2
luminal epithelial cell of mammary gland
1
MCF-7
1
mammary epithelial cell
1
mammary gland epithelial cell
Organ
101
epithelium
59
pancreas
40
connective tissue
14
brain
14
intestine
10
pituitary gland
10
skin of body
9
musculature of body
8
large intestine
7
heart
7
liver
7
lung
7
vasculature
6
adrenal gland
6
blood vessel
6
stomach
5
embryo
5
mammary gland
4
blood
4
bodily fluid
3
adipose tissue
3
extraembryonic component
3
limb
3
small intestine
3
uterus
2
artery
2
esophagus
2
gonad
2
ovary
2
prostate gland
2
thyroid gland
1
bone element
1
bone marrow
1
breast
1
bronchus
1
lymph node
1
lymphatic vessel
1
penis
1
placenta
1
spinal cord
1
spleen
1
thymus
1
vein
Date released
3
November, 2021
2
May, 2021
Software used
5
abc
Lab
AMP-T2D consortium
3
Bing Ren, UCSD
2
Jesse Engreitz, Stanford University
Project
3
ENCODE
2
AMP
RFA
3
ENCODE3
2
AMP
lab.title!
AMP-T2D consortium
software_used.software.name!
deseq2
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR154LWM
released
Annotation file set
: Target gene predictions of Mammary Luminal Epithelial Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR114GRY
released
Annotation file set
: Target gene predictions of Mammary Luminal Epithelial Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR990AWB
released
Annotation file set
: Target gene predictions of Mammary Epithelial from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR249DLQ
released
Annotation file set
: enhancer-gene predicton of MCF-7-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR379EHB
released
Annotation file set
: enhancer-gene predicton of mammary_epithelial_cell-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP