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Schema
Citing CMDGA
Clear Filters
Annotation type
25
accessible chromatin
5
caQTL
1
differential activity
1
variant allelic effects
Annotation Category
1
Gene expression levels
1
Genetic variant effects
Annotation type Category
1
RNA-seq
1
SNP-SELEX
Available data
1
bed bed3+
1
tsv
File set status
2
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
cell line
Biosample term
1
EndoC_BH1
1
purified protein and synthetic DNA oligo binding assay
Organ
1
epithelium
1
pancreas
Date released
110
September, 2023
78
May, 2020
61
February, 2024
51
March, 2023
3
October, 2022
2
February, 2023
1
February, 2021
Software used
1
betacells_cytokines_t1d
Lab
1
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
1
AMP
1
T1D
RFA
1
AMP
1
T1D
annotation_type!
target gene predictions
organ_slims!
vein
Showing 2 of 2 results
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Download
FileSet
DSR309JFA
released
Annotation file set
: Differential activity of transcriptomic analysis in EndoC-βH1 cells following siCALCOCO2 mediated knockdown
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR976GBT
released
Annotation file set
: High-throughput analysis of the binding of human transcription factors to common sequence variants by SNP-SELEX (in-silico assay)
Lab:
Kyle Gaulton, UCSD
Project:
T1D