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Citing CMDGA
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Annotation type
20
candidate regulatory elements
17
target gene predictions
6
binding sites
6
eQTL
6
histone modifications
5
accessible chromatin
3
chromatin state
3
gene expression
1
caQTL
1
differential activity
1
variant allelic effects
Annotation Category
1
Gene expression levels
Annotation type Category
1
RNA-seq
Available data
1
tsv
File set status
1
released
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
1
liver
Disease term
1
coronary artery disease
Organ
epithelium
56
kidney
33
pancreas
18
vasculature
14
connective tissue
12
blood vessel
4
liver
2
adipose tissue
2
artery
2
lymphatic vessel
1
musculature of body
Life stage
1
adult
Date released
1
February, 2024
Software used
1
deseq2
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
assembly!
GRCh38
organ_slims!
epithelium
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FileSet
DSR054IUR
released
Annotation file set
: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for liver (FDR=10%)
Lab:
AMP-T2D consortium
Project:
AMP