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Clear Filters
Annotation type
  • 26candidate regulatory elements
  • 26gene expression
  • 24accessible chromatin
  • 22target gene predictions
  • 17chromatin state
  • 14histone modifications
  • 13binding sites
  • 10eQTL
  • 7differential activity
  • 4Fine-mapped variants
  • 4variant allelic effects
  • 1caQTL
Annotation Category
  • 6Gene expression levels
  • 1cis-regulatory elements
Annotation type Category
  • 3RNA-seq
  • 3scRNA-seq
  • 1ATAC-seq
Available data
  • 5tsv
File set status
  • 7released
Organism
  • 7Homo sapiens
Biosample type
  • 4tissue
  • 3primary cell
Biosample term
  • 4liver
  • 3pancreatic endothelial cell
Organ
  • 92epithelium
  • 56kidney
  • 33pancreas
  • 21vasculature
  • 18connective tissue
  • 15blood vessel
  • 7liver
  • 6adipose tissue
  • 4artery
  • 4musculature of body
  • 2lymphatic vessel
Life stage
  • 4adult
Date released
  • 3March, 2023
  • 2October, 2025
  • 1February, 2024
  • 1March, 2025
Software used
  • 3r
  • 2deseq2
  • 2dreamlet
Lab
  • 4AMP-T2D consortium
  • 3Kyle Gaulton, UCSD
Project
  • 7AMP
Collection Tags
  • 4STARNET
  • 3HPAP
RFA
  • 7AMP

Showing 7 of 7 results

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  • FileSet

    DSR241218

    released

    Annotation file set: The dataset contains differentially accessible cCREs between CAD and control in human liver, derived from STARNET ATAC-seq data (milestone 17).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR505915

    released

    Annotation file set: The dataset contains differentially expressed genes between CAD and control in human liver, derived from STARNET RNA-seq data (milestone 17).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR954EMJ

    released

    Annotation file set: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for liver (FDR=10%)
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR054IUR

    released

    Annotation file set: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for liver (FDR=10%)
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR230XXF

    released

    Annotation file set: Differential activity within endothelial in T2D
    Lab: Kyle Gaulton, UCSD
    Project: AMP
  • FileSet

    DSR481EVB

    released

    Annotation file set: Differential activity within endothelial in T1D
    Lab: Kyle Gaulton, UCSD
    Project: AMP
  • FileSet

    DSR721CKF

    released

    Annotation file set: Differential activity within endothelial in T1D Aab+
    Lab: Kyle Gaulton, UCSD
    Project: AMP
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