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Schema
Citing CMDGA
Clear Filters
Annotation type
1648
candidate regulatory elements
1340
target gene predictions
histone modifications
893
accessible chromatin
814
binding sites
121
variant allelic effects
38
chromatin state
12
caQTL
7
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Annotation Category
7
Genetic variant effects
Annotation type Category
7
RNA-seq
1
Expression arrays
Available data
25
tsv
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
Organism
7
Homo sapiens
Biosample type
4
primary cell
3
tissue
Biosample term
1
endothelial cell
1
islet of Langerhans
1
kidney
mesenchymal stem cell
1
nephron tubule
1
smooth muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
adipose tissue
2
connective tissue
2
epithelium
2
kidney
2
musculature of body
1
pancreas
Life stage
1
adult
Date released
6
February, 2024
1
August, 2021
Software used
4
qTLtools
3
matrix-eQTL
Lab
4
Stephen Parker, UMich
2
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
7
AMP
RFA
5
AMP2
2
AMP
annotation_type!
histone modifications
biosample_term_name!
mesenchymal stem cell
organ_slims!
adipose tissue
Showing 7 of 7 results
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FileSet
DSR228CDY
released
Annotation file set
: eQTL annotation of islet of Langerhans from PMID:31253982
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR829NMX
released
Annotation file set
: Expression QTLs of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR355IUU
released
Annotation file set
: Expression QTLs of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR727SYE
released
Annotation file set
: Expression QTLs of smooth muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR876MNY
released
Annotation file set
: Expression QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR651LEH
released
Annotation file set
: cis-eQTLs of tubulointerstitial in NEPTUNE cohort
Lab:
AMP-T2D consortium
Project:
AMP