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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
35
candidate regulatory elements
19
chromatin state
18
target gene predictions
12
accessible chromatin
8
gene expression
6
eQTL
3
Fine-mapped variants
3
histone modifications
2
hQTL
2
variant allelic effects
1
binding sites
meQTL
1
sQTL
Annotation Category
6
Genetic variant effects
Annotation type Category
6
RNA-seq
Available data
1
bed bed3+
1
tsv
File set status
6
released
Genome assembly (visualization)
4
GRCh38
3
hg19
Organism
6
Homo sapiens
Biosample type
4
tissue
2
primary cell
Biosample term
13
islet of Langerhans
7
liver
7
macrophage
6
lymphoblastoid cell line
6
subcutaneous adipose tissue
4
adipose tissue
4
monocyte
3
blood cell
3
putamen
3
skin of body
3
substantia nigra
2
T cell
2
amygdala
2
anterior cingulate cortex
2
articular chondrocyte
2
blood
2
brain
2
cartilage tissue
2
caudate nucleus
2
cerebellum
2
coronary artery
2
fibroblast
2
frontal cortex
2
hypothalamus
2
iPSC derived cell line
2
muscle
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
neutrophil
2
nucleus accumbens
2
omental fat pad
2
regulatory T cell
2
right atrium auricular region
2
skeletal muscle tissue
2
tibial artery
2
tibial nerve
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
Leydig cell
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
ascending aorta
1
body of pancreas
1
breast
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
colon sigmoid
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
endothelial cell
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
fat cell
1
gastrocnemius medialis(Muscle - Skeletal)
1
heart left ventricle
1
helper T cell
1
kidney
1
layer of hippocampus
1
left ventricle myocardium
1
lung
1
mesenchymal stem cell
1
microglial cell
1
minor salivary gland
1
naive B cel
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
nephron tubule
1
ovary
1
pancreas
1
pituitary gland
1
placenta
1
progenitor cell
1
prostate gland
1
renal glomerulus
1
retina
1
right lobe of liver
1
sensory neuron
1
small intestine
1
smooth muscle cell
1
spinal cord
1
spleen
1
stomach
1
synovial joint
1
testis
1
thyroid gland
1
transverse colon
1
type I muscle cell
1
type II muscle cell
1
uterus
1
vagina
1
visceral abdominal adipose tissue
Organ
3
brain
1
kidney
Life stage
2
adult
Date released
3
January, 2022
1
August, 2021
1
February, 2020
1
May, 2021
Software used
3
qTLtools
1
gtex_eqtl:V8
1
limix
1
matrix-eQTL
Lab
5
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
6
AMP
RFA
5
AMP
1
AMP2
annotation_type!
meQTL
organ_slims!
adrenal gland
Showing 6 of 6 results
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Download
FileSet
DSR306YBC
released
Annotation file set
: brain putamen eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR282GYN
released
Annotation file set
: putamen eQTL of studay Braineac2 from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR786EWQ
released
Annotation file set
: neutrophil eQTL of studay BLUEPRINT from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR792EUZ
released
Annotation file set
: expression quantitative trait loci (eQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD16+ neutrophils) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR434GXV
released
Annotation file set
: eQTL of putamen for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP