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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
3
accessible chromatin
3
candidate regulatory elements
3
chromatin state
2
eQTL
2
target gene predictions
2
variant allelic effects
1
gene expression
0
histone modifications
Annotation Category
2
Genetic variant effects
1
Gene expression levels
Annotation type Category
3
RNA-seq
Available data
2
tsv
File set status
3
released
Genome assembly (visualization)
2
GRCh38
1
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
105
monocyte
33
CD8-positive, alpha-beta T cell
25
islet of Langerhans
23
neural progenitor cell
17
hepatocyte
16
epithelial cell of proximal tubule
14
endothelial cell
14
glomerular endothelial cell
11
breast cancer cell
11
cardiomyocytes
11
macrophage
11
subcutaneous adipose tissue
10
kidney
10
liver
10
progenitor cell of endocrine pancreas
10
regulatory T cell
9
EndoC_BH1
9
H1-hESC
9
extended pluripotent stem (EPS) cells
9
gastric cancer cell
9
induced pluripotent stem cell
9
lymphoblastoid cell line
8
Rhabdomyosarcoma
8
T-helper 1 cell
8
T-helper 17 cell
8
neuroblastoma cell
8
pancreatic ductal cell
7
adipose tissue
7
diffuse intrinsic pontine glioma
7
esophageal adenocarcinoma
7
kidney loop of Henle thin ascending limb epithelial cell
6
B cell
6
B-lymphoblastoid cell line
6
Chondroid Chordoma
6
brain
6
hESC cell
6
kidney interstitial cell
6
liposarcoma
natural killer cell
6
neuroblastoma cell line
6
squamous cell lung carcinoma
5
HepG2
5
T-cell acute lymphoblastic leukemia
5
adipocyte
5
cerebellum
5
fibroblast
5
glomerular visceral epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
melanoma cell
5
mesangial cell
5
neuronal stem cell
5
osteosarcoma
5
putamen
5
substantia nigra
4
T-helper 2 cell
4
amygdala
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
caudate nucleus
4
endothelial cell of hepatic sinusoid
4
frontal cortex
4
gamma-delta T cell
4
heart
4
hypothalamus
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
naive thymus-derived CD8-positive, alpha-beta T cell
4
nephron progenitor
4
nucleus accumbens
4
omental fat pad
4
osteoblast
4
pancreatic acinar cell
4
rhabdomyosarcoma cell
4
right atrium auricular region
4
skeletal muscle tissue
4
smooth muscle cell
4
tibial nerve
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
B Cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Ewing sarcoma
3
Fibroblast
3
Glomerular Capillary Endothelial Cell
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
S-shaped body
3
T Cell
3
T cell
3
T follicular helper cell
3
Transitional Principal-Intercalated Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
acute myeloid leukemia
3
adult endothelial progenitor cell
3
anterior cingulate cortex
3
blood cell
3
body of pancreas
3
cartilage tissue
3
central memory CD8-positive, alpha-beta T cell
3
coronary artery
3
diffuse large B-cell lymphoma
3
effector memory CD8-positive, alpha-beta T cell
3
embryonic stem cell
3
esophageal squamous cell carcinoma
3
glioblastoma cell
3
glioma cell
3
heart left ventricle
3
hepatic stellate cell
3
hepatocyte(AFP)
3
keratinocyte
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
lymphoblast
3
mammary epithelial cell
3
mast cell
3
memory B cell
3
mesenchymal stem cell
3
naive B cel
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
3
pancreatic ductal adenocarcinoma
3
placenta
3
prostate gland
3
retina
3
skin of body
3
smooth muscle cell of the coronary artery
3
stomach
3
testis
3
tibial artery
3
visceral abdominal adipose tissue
2
Ammon's horn
2
B-lymphocyte
2
C1 segment of cervical spinal cord
2
COLO205
2
HS-SY-2 cell
2
Jurkat
2
Kupffer cell
2
MCF-7
2
Mantle cell lymphoma
2
RS4-11 cell
2
Rh-4 cell
2
Th1 cell
2
acute myeloid leukemia cell
2
adrenal gland
2
articular chondrocyte
2
ascending aorta
Organ
3
artery
3
blood vessel
3
limb
3
vasculature
Life stage
2
adult
Date released
1
February, 2020
1
January, 2020
1
January, 2022
Software used
1
gtex_eqtl:V8
1
qTLtools
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
natural killer cell
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR599OOZ
released
Annotation file set
: artery tibial eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR686ILE
released
Annotation file set
: eQTL of tibial artery for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR976UYN
released
Annotation file set
: Gene expression summary of TPM of artery tibial from GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP