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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
2
accessible chromatin
2
candidate regulatory elements
2
target gene predictions
1
chromatin state
1
eQTL
1
gene expression
Annotation Category
2
Target gene links
1
Gene expression levels
1
Genetic variant effects
Annotation type Category
2
RNA-seq
1
ChIP-seq
1
DNase-seq
1
pCHi-C
Available data
2
bed bed3+
2
tsv
File set status
4
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
55
HeLa-S3
47
H1-hESC
25
islet of Langerhans
23
K562
23
heart
23
stomach
22
kidney
22
monocyte
19
A549
19
CD14-positive monocyte
19
HFFc6
19
adrenal gland
19
brain
19
lung
18
endothelial cell
18
liver
18
small intestine
17
epithelial cell of proximal tubule
17
hepatocyte
16
muscle of arm
16
placenta
15
adipose tissue
15
glomerular endothelial cell
14
common myeloid progenitor, CD34-positive
14
large intestine
14
muscle of leg
14
thymus
13
left lung
13
macrophage
13
muscle of back
13
regulatory T cell
12
B cell
12
neural progenitor cell
11
T-helper 1 cell
11
T-helper 17 cell
11
cardiomyocytes
11
hematopoietic multipotent progenitor cell
11
right lung
11
subcutaneous adipose tissue
10
induced pluripotent stem cell
10
pericyte cell
10
pituitary stalk
10
right kidney
10
smooth muscle cell
10
spleen
9
CD4-positive, alpha-beta memory T cell
9
EndoC_BH1
9
extended pluripotent stem (EPS) cells
9
heart left ventricle
9
left kidney
9
pancreatic ductal cell
9
progenitor cell of endocrine pancreas
9
renal cortex interstitium
9
renal pelvis
9
spinal cord
8
CD8-positive, alpha-beta T cell
8
GM12878
8
H9
8
adipocyte
8
body of pancreas
natural killer cell
8
ovary
8
psoas muscle
7
CD8-positive, alpha-beta memory T cell
7
T-helper 2 cell
7
cardiomyocytes (cardiac muscle cell)
7
dendritic cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
lymphocyte
7
pancreatic delta cell
7
sigmoid colon
7
tibial nerve
7
trophoblast cell
6
MCF-7
6
T cell
6
caudate nucleus
6
cerebellum
6
coronary artery
6
fibroblast
6
frontal cortex
6
glomerular visceral epithelial cell
6
heart right ventricle
6
iPSC derived cell line
6
kidney interstitial cell
6
lymphoblastoid cell line
6
mesenchymal stem cell
6
mononuclear cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
olfactory receptor cell
6
omental fat pad
6
pancreas
6
pancreatic acinar cell
6
pancreatic alpha cell
6
pancreatic beta cell
6
right atrium auricular region
6
skeletal muscle tissue
6
substantia nigra
6
thyroid gland
6
transverse colon
5
aorta
5
astrocyte
5
cardiac precursors (cardiac muscle cell)
5
gastrocnemius medialis
5
keratinocyte
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
memory B cell
5
mesangial cell
5
muscle of trunk
5
naive thymus-derived CD4-positive, alpha-beta T cell
5
neutrophil
5
putamen
5
retina
5
testis
5
tibial artery
4
Ammon's horn
4
CyT49
4
HUES8
4
adult endothelial progenitor cell
4
ascending aorta
4
bone tissue
4
chorionic villus
4
colon epithelial cell
4
endocrine pancreas
4
endothelial cell of hepatic sinusoid
4
endothelial cell of umbilical vein
4
esophagus
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin keratinocyte
4
gamma-delta T cell
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
layer of hippocampus
4
mammary gland epithelial cell
4
nephron progenitor
4
osteoblast
4
skeletal muscle myoblast
4
skeletal muscle satellite cell
4
skin of body
4
uterus
4
vagina
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
B Cell
3
CD4-positive, alpha-beta T cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Fibroblast
3
Glomerular Capillary Endothelial Cell
3
HCT116
3
HepG2
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Peyer's patch
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
Regulatory T Cell
Organ
4
brain
Life stage
3
adult
Date released
1
February, 2020
1
January, 2020
1
March, 2020
1
September, 2022
Software used
2
r
1
gtex_eqtl:V8
1
nospecificsoft_customcode
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
natural killer cell
Showing 4 of 4 results
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Download
FileSet
DSR394VGN
released
Annotation file set
: Target gene predictions for BSS00071 Ammon's horn from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR890JAM
released
Annotation file set
: A target gene prediction annotation in Human Hippocampus of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR722ZWO
released
Annotation file set
: eQTL of Ammon's horn(Hippocampus) for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR821ULJ
released
Annotation file set
: Gene expression summary of TPM of brain hippocampus from GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP