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Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
1
eQTL
1
gene expression
0
variant allelic effects
Annotation Category
1
Gene expression levels
1
Genetic variant effects
Annotation type Category
2
RNA-seq
Available data
2
tsv
File set status
2
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
25
islet of Langerhans
19
monocyte
17
epithelial cell of proximal tubule
15
hepatocyte
14
glomerular endothelial cell
12
endothelial cell
12
macrophage
12
subcutaneous adipose tissue
11
cardiomyocytes
9
EndoC_BH1
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
9
regulatory T cell
8
H1-hESC
8
T-helper 1 cell
8
T-helper 17 cell
8
adipose tissue
8
fibroblast
8
kidney
7
kidney loop of Henle thin ascending limb epithelial cell
7
liver
7
neural progenitor cell
7
pancreatic ductal cell
6
lymphoblastoid cell line
6
right atrium auricular region
6
tibial nerve
5
cardiac precursors (cardiac muscle cell)
5
cardiomyocytes (cardiac muscle cell)
5
coronary artery
5
glomerular visceral epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
putamen
5
smooth muscle cell
5
tibial artery
4
T cell
4
T-helper 2 cell
4
body of pancreas
4
bone tissue
4
caudate nucleus
4
endothelial cell of hepatic sinusoid
4
frontal cortex
4
gamma-delta T cell
4
heart left ventricle
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
naive thymus-derived CD8-positive, alpha-beta T cell
4
omental fat pad
4
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic beta cell
4
pancreatic delta cell
4
skeletal muscle fiber
4
substantia nigra
4
vascular associated smooth muscle cell
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
B Cell
3
CD8-positive, alpha-beta T cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Fibroblast
3
Glomerular Capillary Endothelial Cell
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
Schwann cell
3
T Cell
3
T follicular helper cell
3
Transitional Principal-Intercalated Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
adipocyte
3
adult endothelial progenitor cell
3
amygdala
3
anterior cingulate cortex
3
ascending aorta
3
blood cell
3
brain
3
central memory CD8-positive, alpha-beta T cell
3
cerebellum
3
cerebellum (Hemisphere)
3
effector memory CD8-positive, alpha-beta T cell
3
enterocyte
3
heart
3
hepatocyte(AFP)
3
hypothalamus
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney interstitial cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
memory B cell
3
mesangial cell
3
myofibroblast cell
3
naive B cel
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
natural killer cell
3
nucleus accumbens
3
pancreatic polypeptide-secreting cell
3
retina
3
skin of body
3
visceral abdominal adipose tissue
2
cardiac fibroblast
2
muscle of leg
2
Ammon's horn
2
B cell
2
C1 segment of cervical spinal cord
2
Kupffer cell
2
MIN6
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
adrenal gland
2
articular chondrocyte
2
basal cell
2
blood
2
cardiac muscle cell
2
cartilage tissue
2
dorsolateral prefrontal cortex
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
epithelial cell of esophagus
2
gastrocnemius medialis(Muscle - Skeletal)
2
goblet cell
2
heart right ventricle
2
hepatic stellate cell
2
iPSC derived cell line
2
kidney glomerular epithelial cell
2
kidney inner medulla collecting duct intercalated cell
2
left cardiac atrium
2
left ventricle myocardium
2
lung
2
mast cell
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
mesenchymal stem cell
2
minor salivary gland
2
muscle
2
neutrophil
2
osteoblast
2
ovary
2
pancreas
2
pancreatic stellate cell
2
renal cortical epithelial cell
2
right lobe of liver
2
skeletal muscle myoblast
2
skeletal muscle satellite cell
2
skeletal muscle tissue
2
smooth muscle cell of the coronary artery
2
spleen
2
stomach
2
testis
2
type I muscle cell
2
type II muscle cell
Organ
2
limb
2
musculature of body
Life stage
2
adult
Date released
2
February, 2020
Software used
1
gtex_eqtl:V8
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
relevant_life_stage!
fetal
Showing 2 of 2 results
table-tab-icon
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Download
FileSet
DSR192JMP
released
Annotation file set
: Gene expression summary of TPM of skeletal muscle from GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR222BED
released
Annotation file set
: eQTL of gastrocnemius medialis(Muscle - Skeletal) for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP