Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
17
accessible chromatin
17
target gene predictions
16
candidate regulatory elements
9
chromatin state
2
histone modifications
2
variant allelic effects
1
caQTL
1
eQTL
1
gene expression
Annotation Category
1
Gene expression levels
1
Genetic variant effects
Annotation type Category
1
RNA-seq
1
snRNA-seq
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
9
islet of Langerhans
5
liver
4
subcutaneous adipose tissue
3
adipose tissue
2
blood
2
cartilage tissue
2
endothelial cell
2
mesenchymal stem cell
2
skeletal muscle fiber
2
skeletal muscle tissue
2
smooth muscle cell
2
type I muscle cell
2
type II muscle cell
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
adipocyte
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
body of pancreas
1
caudate nucleus
1
cerebellum
1
cerebellum (Hemisphere)
1
coronary artery
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
frontal cortex
1
gastrocnemius medialis(Muscle - Skeletal)
1
glial cell
1
hypothalamus
1
kidney
1
left ventricle myocardium
1
leukocyte
1
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
nephron tubule
1
neural cell
1
neutrophil
1
nucleus accumbens
1
omental fat pad
1
progenitor cell
1
putamen
1
renal glomerulus
1
right atrium auricular region
1
right lobe of liver
1
skeletal muscle satellite cell
1
substantia nigra
1
synovial joint
1
tibial artery
1
tibial nerve
0
B cell
Date released
2
February, 2024
Software used
1
deeptools
1
qTLtools
1
r
1
samtools
1
umitools
Lab
2
Stephen Parker, UMich
Project
2
AMP
RFA
2
AMP2
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR727SYE
released
Annotation file set
: Expression QTLs of smooth muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR873DHZ
released
Annotation file set
: Cell type gene expression mean TPM and bw of smooth muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP