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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
19
candidate regulatory elements
10
chromatin state
10
target gene predictions
2
gene expression
1
accessible chromatin
1
binding sites
1
differential activity
1
eQTL
1
histone modifications
Annotation Category
2
Gene expression levels
1
Genetic variant effects
Annotation type Category
3
RNA-seq
Available data
2
tsv
File set status
3
released
Genome assembly (visualization)
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
22
islet of Langerhans
16
epithelial cell of proximal tubule
14
glomerular endothelial cell
13
hepatocyte
11
cardiomyocytes
11
subcutaneous adipose tissue
9
endothelial cell
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
8
H1-hESC
8
kidney
8
liver
8
macrophage
7
adipose tissue
7
kidney loop of Henle thin ascending limb epithelial cell
7
neural progenitor cell
7
regulatory T cell
6
T-helper 1 cell
6
T-helper 17 cell
6
kidney interstitial cell
6
lymphoblastoid cell line
5
glomerular visceral epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
5
pancreatic ductal cell
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
cerebellum
4
endothelial cell of hepatic sinusoid
4
frontal cortex
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
nephron progenitor
4
omental fat pad
4
putamen
4
right atrium auricular region
4
substantia nigra
4
tibial nerve
3
S-shaped body
3
adult endothelial progenitor cell
3
amygdala
3
anterior cingulate cortex
3
blood cell
3
body of pancreas
3
brain
3
cardiomyocytes (cardiac muscle cell)
3
caudate nucleus
3
coronary artery
3
heart
3
hepatocyte(AFP)
3
hypothalamus
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
monocyte
3
natural killer cell
3
nucleus accumbens
3
skeletal muscle tissue
3
skin of body
3
tibial artery
3
visceral abdominal adipose tissue
2
Ammon's horn
2
C1 segment of cervical spinal cord
2
Kupffer cell
2
T cell
2
T-helper 2 cell
2
adipocyte
2
adrenal gland
2
ascending aorta
2
blood
2
cerebellum (Hemisphere)
2
dorsolateral prefrontal cortex
2
fibroblast
2
gamma-delta T cell
2
gastrocnemius medialis(Muscle - Skeletal)
2
heart left ventricle
2
iPSC derived cell line
2
kidney inner medulla collecting duct intercalated cell
2
left ventricle myocardium
2
leukocyte
2
lung
2
mesenchymal stem cell
2
minor salivary gland
2
muscle
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
osteoblast
2
ovary
2
pancreatic acinar cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic delta cell
2
pancreatic stellate cell
2
renal vesicle
2
retina
2
right lobe of liver
2
skeletal muscle fiber
2
skeletal muscle satellite cell
2
smooth muscle cell
2
smooth muscle cell of the coronary artery
2
spleen
2
stomach
2
testis
2
type I muscle cell
2
type II muscle cell
2
uterus
2
vagina
2
vascular associated smooth muscle cell
1
B-1 B cell
1
B-1a B cell
1
B-2 B cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD8-positive, alpha-beta T cell
1
Leydig cell
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
T follicular helper cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
alpha-beta T cell
1
alternatively activated macrophage
1
aorta
1
aortic valve
1
astrocyte
1
bladder
1
breast
1
breast - mammary tissue
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
cells - EBV-transformed lymphocytes
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
central memory CD8-positive, alpha-beta T cell
1
cerebellar hemisphere
1
cervix - ectocervix
1
cervix - endocervix
1
cholangiocyte
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
cortex
1
cortex of kidney
1
dendritic cell
1
diencephalon
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
effector CD8-positive, alpha-beta T cell
1
effector memory CD4-positive, alpha-beta T cell
1
effector memory CD8-positive, alpha-beta T cell
1
endothelial cell of coronary artery
1
epithelial cell of distal tubule
1
erythroid lineage cell
1
esophagus
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
esophagus muscularis mucosa
1
excitatory neuron
1
fallopian tube
1
fat cell
1
glial cell
1
heart right ventricle
1
helper T cell
1
hepatic stellate cell
1
hippocampal neuron
1
inflammatory macrophage
1
kidney - cortex
1
kidney - medulla
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney tubule cell
1
layer of hippocampus
1
left cardiac atrium
1
lower motor neuron
1
mature B cell
1
memory B cell
1
mesenchymal cell
1
mesenchymal stem cell of adipose
1
meso-epithelial cell
1
metanephros
1
microglial cell
1
mitral valve
1
naive B cel
1
naive B cell
1
nephron tubule
1
neural cell
1
neutrophil
1
occipital lobe
Organ
3
adipose tissue
3
connective tissue
Life stage
2
adult
Date released
2
February, 2021
1
January, 2022
May, 2021
Software used
2
r
1
qTLtools
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
month_released!
May, 2021
Showing 3 of 3 results
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Download
FileSet
DSR631EVX
released
Annotation file set
: adipose visceral eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR825KTA
released
Annotation file set
: Gene expression TPM of developmental origins define epigenomic differences between subcutaneous and visceral adipocytes [RNA_seq_Whole]
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR477UYX
released
Annotation file set
: Gene expression TPM of developmental origins define epigenomic differences between subcutaneous and visceral adipocytes of GSE110821 [RNA-Seq]
Lab:
AMP-T2D consortium
Project:
AMP