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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
20
target gene predictions
18
accessible chromatin
18
chromatin state
7
variant allelic effects
5
histone modifications
4
eQTL
3
binding sites
1
gene expression
Annotation Category
4
Genetic variant effects
1
Gene expression levels
Annotation type Category
5
RNA-seq
Available data
1
tsv
File set status
5
released
Genome assembly (visualization)
4
GRCh38
Organism
5
Homo sapiens
Biosample type
3
tissue
2
primary cell
Biosample term
24
islet of Langerhans
19
monocyte
15
epithelial cell of proximal tubule
13
glomerular endothelial cell
13
hepatocyte
11
cardiomyocytes
11
endothelial cell
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
macrophage
9
progenitor cell of endocrine pancreas
9
regulatory T cell
9
subcutaneous adipose tissue
8
EndoC_BH1
8
H1-hESC
8
T-helper 1 cell
8
T-helper 17 cell
8
kidney
7
adipose tissue
7
kidney loop of Henle thin ascending limb epithelial cell
7
liver
7
neural progenitor cell
6
kidney interstitial cell
6
lymphoblastoid cell line
6
pancreatic ductal cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
4
T-helper 2 cell
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
endothelial cell of hepatic sinusoid
4
gamma-delta T cell
4
glomerular visceral epithelial cell
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
mesangial cell
4
naive thymus-derived CD8-positive, alpha-beta T cell
4
nephron progenitor
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
B Cell
3
CD8-positive, alpha-beta T cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Fibroblast
3
Glomerular Capillary Endothelial Cell
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
S-shaped body
3
T Cell
3
T follicular helper cell
3
Transitional Principal-Intercalated Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
adult endothelial progenitor cell
3
blood cell
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
hepatocyte(AFP)
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
memory B cell
3
naive B cel
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
natural killer cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
3
putamen
3
skin of body
3
smooth muscle cell
3
substantia nigra
3
visceral abdominal adipose tissue
2
B cell
2
Kupffer cell
2
T cell
2
adipocyte
2
adrenal gland
2
amygdala
2
anterior cingulate cortex
2
articular chondrocyte
2
blood
2
brain
2
cartilage tissue
2
caudate nucleus
2
coronary artery
2
dorsolateral prefrontal cortex
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
fibroblast
2
frontal cortex
2
heart
2
hypothalamus
2
iPSC derived cell line
2
kidney inner medulla collecting duct intercalated cell
2
leukocyte
2
lung
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
mesenchymal stem cell
2
minor salivary gland
2
muscle
2
neutrophil
2
nucleus accumbens
2
omental fat pad
2
osteoblast
2
ovary
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
renal vesicle
2
right atrium auricular region
2
skeletal muscle fiber
2
skeletal muscle tissue
2
spleen
2
stomach
2
testis
2
tibial artery
2
type I muscle cell
2
type II muscle cell
2
uterus
2
vagina
2
vascular associated smooth muscle cell
1
Ammon's horn
1
B-1 B cell
1
B-1a B cell
1
B-2 B cell
1
C1 segment of cervical spinal cord
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
Leydig cell
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
Schwann cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
activated pancreatic stellate cell
1
alpha-beta T cell
1
alternatively activated macrophage
1
aorta
1
aortic valve
1
ascending aorta
1
astrocyte
1
bladder
1
body of pancreas
1
breast
1
breast - mammary tissue
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
Organ
2
brain
2
connective tissue
1
kidney
Life stage
1
adult
Date released
4
January, 2022
February, 2020
1
March, 2024
Software used
4
qTLtools
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
month_released!
February, 2020
Showing 5 of 5 results
table-tab-icon
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Download
FileSet
DSR200YVF
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Kidney - Medulla.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR191XXQ
released
Annotation file set
: brain naive eQTL of studay ROSMAP from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR827FUP
released
Annotation file set
: fibroblast eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR172SFE
released
Annotation file set
: fibroblast eQTL of studay GENCORD from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR999BSN
released
Annotation file set
: brain eQTL of studay BrainSeq from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP