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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
5
candidate regulatory elements
3
Fine-mapped variants
3
chromatin state
3
eQTL
2
gene expression
2
target gene predictions
1
accessible chromatin
1
histone modifications
Annotation Category
3
Genetic variant effects
2
Gene expression levels
Annotation type Category
5
RNA-seq
Available data
3
tsv
File set status
5
released
Genome assembly (visualization)
3
GRCh38
1
hg19
Organism
5
Homo sapiens
Biosample type
4
tissue
1
in vitro differentiated cells
Biosample term
24
islet of Langerhans
11
cardiomyocytes
11
subcutaneous adipose tissue
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
8
kidney
8
liver
7
adipose tissue
7
neural progenitor cell
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
cerebellum
4
frontal cortex
4
omental fat pad
4
putamen
4
right atrium auricular region
4
substantia nigra
4
tibial nerve
3
amygdala
3
anterior cingulate cortex
3
body of pancreas
3
brain
3
caudate nucleus
3
coronary artery
3
heart
3
hepatocyte(AFP)
3
hypothalamus
3
nucleus accumbens
3
pancreatic ductal cell
3
skeletal muscle tissue
3
skin of body
3
tibial artery
3
visceral abdominal adipose tissue
2
Ammon's horn
2
C1 segment of cervical spinal cord
2
adrenal gland
2
ascending aorta
2
blood
2
cartilage tissue
2
cerebellum (Hemisphere)
2
dorsolateral prefrontal cortex
2
gastrocnemius medialis(Muscle - Skeletal)
2
heart left ventricle
2
left ventricle myocardium
2
lung
2
minor salivary gland
2
ovary
2
retina
2
right lobe of liver
2
spleen
2
stomach
2
testis
2
uterus
2
vagina
1
abdominal aorta artery
1
adipocyte
1
aorta
1
aortic valve
1
bladder
1
breast
1
breast - mammary tissue
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
cerebellar hemisphere
1
cervix - ectocervix
1
cervix - endocervix
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
cortex
1
cortex of kidney
1
diencephalon
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
endothelial cell
1
esophagus
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
esophagus muscularis mucosa
1
excitatory neuron
1
fallopian tube
1
heart right ventricle
1
hematopoietic multipotent progenitor cell
1
hippocampal neuron
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
kidney - cortex
1
kidney - medulla
1
layer of hippocampus
1
left cardiac atrium
1
lower motor neuron
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
metanephros
1
mitral valve
1
nephron tubule
1
occipital lobe
1
pancreas
1
parietal lobe
1
pituitary
1
pituitary gland
1
placenta
1
prostate
1
prostate gland
1
pulmonary valve
1
renal glomerulus
1
right cardiac atrium
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
small intestine
1
small intestine - terminal Ileum
1
smooth muscle cell
1
spinal cord
1
stem cell
1
synovial joint
1
temporal lobe
1
thyroid
1
thyroid gland
1
transverse colon
1
tricuspid valve
1
whole blood
Organ
5
brain
Life stage
2
adult
Date released
2
January, 2022
1
February, 2020
1
February, 2024
1
January, 2020
Software used
2
qTLtools
2
r
1
gtex_eqtl:V8
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR821QDG
released
Annotation file set
: brain substantia nigra eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR009DSA
released
Annotation file set
: substantia nigra eQTL of studay Braineac2 from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR317RKZ
released
Annotation file set
: Gene expression annotation of RNA-seq_iPSC-derived hippocampal DG-like neurons
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR601BGX
released
Annotation file set
: eQTL of substantia nigra for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR207SBP
released
Annotation file set
: Gene expression summary of TPM of brain substantia nigra from GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP