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Schema
Citing CMDGA
Clear Filters
Annotation type
9
gene expression
6
target gene predictions
2
binding sites
1
accessible chromatin
1
eQTL
1
histone modifications
Annotation Category
6
Target gene links
1
Genetic variant effects
Annotation type Category
6
ATAC-seq
1
RNA-seq
snATAC-seq
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
6
GRCh38
Organism
7
Homo sapiens
Biosample type
7
primary cell
Biosample term
15
CD14-positive monocyte
9
macrophage
9
pericyte cell
7
endothelial cell
7
smooth muscle cell
6
fibroblast
6
olfactory receptor cell
5
monocyte
4
CD8-positive, alpha-beta T cell
3
CD4-positive, alpha-beta T cell
3
astrocyte
3
blood cell
3
colon epithelial cell
3
keratinocyte
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
neutrophil
3
pancreatic A cell
3
type B pancreatic cell
2
B cell
2
CD4-positive helper T cell
2
T cell
2
T-cell
2
activated CD4-positive, alpha-beta T cell
2
articular chondrocyte
2
blood vessel smooth muscle cell
2
cortical cell of adrenal gland
2
endothelial cell of umbilical vein
2
enteric smooth muscle cell
2
erythroblast
2
fat cell
2
gabaergic neuron
2
glutamatergic neuron
2
hepatocyte
2
luminal epithelial cell of mammary gland
2
microglial cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell
2
pancreatic acinar cell
2
pancreatic ductal cell
2
regulatory T cell
2
smooth muscle cell of the esophagus
2
type I muscle cell
2
type II muscle cell
2
type II pneumocyte
1
B cell, CD19-positive
1
CD56-positive, CD161-positive immature natural killer cell
1
Leydig cell
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
activated CD8-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
alveolar macrophage
basal cell
1
basal cell of epidermis
1
cardiac endothelial cell
1
cardiac muscle cell
1
ciliated cell
1
club cell
1
colon goblet cell
1
common myeloid progenitor, CD34-positive
1
eccrine cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
1
enteric neuron
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
epithelial cell of prostate
1
fibroblast of arm
1
fibroblast of cardiac tissue
1
fibroblast of dermis
1
fibroblast of lung
1
foreskin fibroblast
1
foveolar cell of stomach
1
granular cell of epidermis
1
helper T cell
1
inflammatory macrophage
1
intestinal tuft cell
1
luteal cell
1
mammary epithelial cell
1
mammary gland epithelial cell
1
mast cell
1
mature NK T cell
1
megakaryocyte
1
megakaryocyte-erythroid progenitor cell
1
melanocyte
1
memory B cell
1
mesenchymal stem cell
1
mesothelial cell
1
myoepithelial cell
1
naive B cel
1
naive B cell
1
naive t cell
1
non keratinizing barrier epithelial cell
1
oligodendrocyte
1
oligodendrocyte precursor cell
1
osteoblast
1
pancreatic delta cell
1
paneth cell
1
parietal cell
1
peptic cell
1
plasma cell
1
progenitor cell
1
regular atrial cardiac myocyte
1
respiratory goblet cell
1
schwann cell
1
sensory neuron
1
skeletal muscle fibroblast
1
skeletal muscle satellite cell
1
skin fibroblast
1
small intestine goblet cell
1
smooth muscle cell of the coronary artery
1
stomach neuroendocrine cell
1
stromal cell
1
thyroid follicular cell
1
trophoblast cell
1
type I cell of adrenal cortex
1
type I pneumocyte
1
type II cell of adrenal cortex
1
uterine smooth muscle cell
1
ventricular cardiac muscle cell
Organ
7
epithelium
Date released
6
November, 2021
1
February, 2024
Software used
6
abc
1
qTLtools
Lab
6
Bing Ren, UCSD
1
Stephen Parker, UMich
Project
6
ENCODE
1
AMP
RFA
6
ENCODE3
1
AMP2
annotation_type_category!
snATAC-seq
biosample_term_name!
basal cell
month_released!
September, 2022
Showing 7 of 7 results
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Download
FileSet
DSR885FFE
released
Annotation file set
: Target gene predictions of Endothelial Cell (General) 3 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR255QVL
released
Annotation file set
: Target gene predictions of Endothelial Cell (General) 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR460FXP
released
Annotation file set
: Target gene predictions of Endothelial Cell (General) 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR913WND
released
Annotation file set
: Target gene predictions of Endothelial (Exocrine Tissues) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR111VBL
released
Annotation file set
: Target gene predictions of Blood Brain Barrier Endothelial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR915OZA
released
Annotation file set
: Target gene predictions of Alveolar Capillary Endothelial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR876MNY
released
Annotation file set
: Expression QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP