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Schema
Citing CMDGA
Clear Filters
Annotation type
2
target gene predictions
1
eQTL
1
gene expression
Annotation Category
2
Target gene links
1
Genetic variant effects
Annotation type Category
1
ATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
1
RNA-seq
1
pCHi-C
Available data
2
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
22
stomach
20
heart
18
adrenal gland
18
brain
18
lung
18
small intestine
17
liver
16
muscle of arm
16
placenta
15
kidney
14
islet of Langerhans
14
large intestine
14
muscle of leg
14
thymus
13
left lung
13
muscle of back
12
adipose tissue
11
right lung
10
right kidney
9
left kidney
9
renal cortex interstitium
9
renal pelvis
9
spleen
8
heart left ventricle
8
psoas muscle
7
ovary
7
sigmoid colon
6
body of pancreas
6
pancreas
6
subcutaneous adipose tissue
6
thyroid gland
6
transverse colon
5
caudate nucleus
5
coronary artery
5
gastrocnemius medialis
5
heart right ventricle
5
muscle of trunk
5
skeletal muscle tissue
5
substantia nigra
5
tibial nerve
4
aorta
4
cerebellum
4
chorionic villus
4
endocrine pancreas
4
esophagus
4
frontal cortex
4
layer of hippocampus
4
omental fat pad
4
putamen
4
retina
4
right atrium auricular region
4
skin of body
4
testis
4
tibial artery
3
Ammon's horn
3
Peyer's patch
3
ascending aorta
3
breast epithelium
3
chorion membrane
3
esophagus muscularis mucosa
3
prostate gland
3
trophoblast
3
upper lobe of left lung
3
uterus
3
vagina
2
Brodmann (1909) area 46
2
amygdala
2
angular gyrus
2
anterior cingulate cortex
2
blood
2
cartilage tissue
2
cingulate gyrus
2
colonic mucosa
2
dorsolateral prefrontal cortex
2
duodenal mucosa
2
esophagus squamous epithelium
2
eye
2
hypothalamus
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
nucleus accumbens
2
parathyroid adenoma
2
right cardiac atrium
2
right lobe of liver
2
right renal cortex interstitium
2
right renal pelvis
2
stomach smooth muscle
2
temporal lobe
2
thoracic aorta
2
tongue
2
urinary bladder
1
abdominal aorta artery
1
amnion
1
arm bone
1
beige adipocyte
1
bladder (urinary bladder)
1
breast
1
cardiac ventricle
1
cerebellar cortex
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
colon sigmoid
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
embryonic facial prominence
1
esophagus mucosa
1
femur
1
gastric (mucosa of stomach)
1
gastrocnemius medialis(Muscle - Skeletal)
1
gastroesophageal sphincter
1
germinal center
1
germinal matrix
1
globus pallidus
1
inferior parietal cortex
1
left cardiac atrium
1
left ventricle myocardium
1
leg bone
1
medulla oblongata
1
midbrain
1
middle frontal gyrus
1
minor salivary gland
1
mucosa of stomach
1
nephron tubule
1
occipital lobe
1
pituitary gland
1
pons
1
rectum smooth muscle tissue
1
renal glomerulus
1
superior temporal gyrus
1
synovial joint
1
umbilical cord
1
visceral abdominal adipose tissue
1
white adipose tissue
Organ
2
brain
1
adipose tissue
1
connective tissue
Date released
1
January, 2022
1
March, 2020
1
May, 2021
Software used
1
abc
1
nospecificsoft_customcode
1
qTLtools
Lab
2
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
3
AMP
RFA
3
AMP
organ_slims!
spinal cord
Showing 3 of 3 results
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Download
FileSet
DSR129VOZ
released
Annotation file set
: DLPFC naive eQTL of studay CommonMind from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR719JYF
released
Annotation file set
: enhancer-gene predicton of white_adipose-Loft2014 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR360WGG
released
Annotation file set
: A target gene prediction annotation in Human Dorsolateral Prefrontal Cortex (DLPFC) of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP