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Citing CMDGA
Clear Filters
Annotation type
5
target gene predictions
4
candidate regulatory elements
4
chromatin state
1
accessible chromatin
1
eQTL
Annotation Category
5
Target gene links
1
Genetic variant effects
Annotation type Category
5
DNase-seq
4
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
RNA-seq
Available data
5
bed bed3+
File set status
6
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
6
Homo sapiens
Biosample type
6
tissue
Biosample term
14
large intestine
7
sigmoid colon
6
transverse colon
4
colon epithelial cell
3
HCT116
2
HT-29
2
colonic mucosa
2
megakaryocyte
2
mucosa of rectum
2
muscle layer of colon
1
HCT-116 cell
1
HS-27A
1
HS-5
1
KMS-11
1
L1-S8
1
L1-S8R
1
MG63
1
NCI-H929
1
OCI-LY1
1
OCI-LY3
1
SJSA1
1
SW480
1
arm bone
1
colon sigmoid
1
femur
1
leg bone
1
rectum smooth muscle tissue
1
stromal cell of bone marrow
Organ
6
intestine
6
large intestine
0
bone element
Life stage
4
adult
Date released
4
September, 2022
1
January, 2022
1
May, 2021
Software used
4
r
1
abc
1
qTLtools
Lab
5
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
6
AMP
month_released!
February, 2021
Showing 6 of 6 results
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FileSet
DSR372VZM
released
Annotation file set
: Target gene predictions for BSS01851 transverse colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR538EBT
released
Annotation file set
: Target gene predictions for BSS01850 transverse colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR684ITQ
released
Annotation file set
: Target gene predictions for BSS01849 transverse colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR195DNM
released
Annotation file set
: Target gene predictions for BSS01848 transverse colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR899VFT
released
Annotation file set
: colon transverse eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR692JFQ
released
Annotation file set
: enhancer-gene predicton of transverse_colon-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP