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Schema
Citing CMDGA
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Annotation type
59
accessible chromatin
18
candidate regulatory elements
9
chromatin state
9
target gene predictions
6
binding sites
4
histone modifications
2
variant allelic effects
1
eQTL
1
gene expression
Annotation Category
3
Genetic variant effects
Annotation type Category
2
DNase-seq
1
RNA-seq
Available data
2
bed bed3+
1
tsv
File set status
3
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Biosample term
2
retina
1
retinal pigment epithelial cell
Organ
45
brain
44
epithelium
37
connective tissue
26
pancreas
21
vasculature
20
kidney
16
adipose tissue
16
heart
15
blood vessel
14
musculature of body
13
limb
12
liver
9
artery
6
intestine
5
esophagus
4
nerve
4
skin of body
3
eye
3
gonad
3
stomach
3
ureter
2
adrenal gland
2
blood
2
bodily fluid
2
large intestine
2
lung
2
prostate gland
2
spinal cord
2
testis
thyroid gland
1
breast
1
bronchus
1
extraembryonic component
1
mammary gland
1
mouth
1
ovary
1
pituitary gland
1
placenta
1
small intestine
1
spleen
1
uterus
1
vagina
1
vein
Life stage
1
adult
Date released
2
May, 2020
1
February, 2020
Software used
2
deltasvm
1
qTLtools
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
organ_slims!
thyroid gland
Showing 3 of 3 results
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Download
FileSet
DSR787MHT
released
Annotation file set
: Genetic variants with deltaSVM predictions in retinal pigment epithelial cell DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR757CEL
released
Annotation file set
: Genetic variants with deltaSVM predictions in retina DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR010VOR
released
Annotation file set
: cis-eQTL of eye from EyeGEx
Lab:
AMP-T2D consortium
Project:
AMP