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Schema
Citing CMDGA
Clear Filters
Annotation type
146
candidate regulatory elements
80
target gene predictions
74
chromatin state
27
accessible chromatin
11
gene expression
7
binding sites
7
eQTL
7
histone modifications
7
variant allelic effects
6
Fine-mapped variants
2
caQTL
1
differential activity
Annotation Category
7
Genetic variant effects
Annotation type Category
7
RNA-seq
1
Expression arrays
Available data
2
bed bed3+
2
tsv
File set status
7
released
Genome assembly (visualization)
6
hg19
3
GRCh38
Organism
7
Homo sapiens
Biosample type
5
tissue
2
primary cell
Biosample term
2
skeletal muscle tissue
1
esophagus muscularis mucosa
1
gastrocnemius medialis(Muscle - Skeletal)
1
left ventricle myocardium
1
type I muscle cell
1
type II muscle cell
Organ
29
brain
21
connective tissue
15
pancreas
13
adipose tissue
7
liver
7
musculature of body
6
blood vessel
6
heart
6
vasculature
5
artery
5
limb
4
kidney
3
epithelium
3
esophagus
3
gonad
3
intestine
3
skin of body
2
blood
2
bodily fluid
2
large intestine
2
nerve
2
spinal cord
2
testis
1
adrenal gland
1
breast
1
extraembryonic component
1
eye
1
lung
1
mouth
1
ovary
1
pituitary gland
1
placenta
1
prostate gland
1
small intestine
1
spleen
1
stomach
1
thyroid gland
1
uterus
1
vagina
Life stage
3
adult
1
unknown
Date released
2
February, 2020
2
February, 2024
1
August, 2021
1
February, 2021
1
January, 2022
Software used
4
qTLtools
2
gtex_eqtl:V8
1
matrix-eQTL
Lab
5
AMP-T2D consortium
2
Stephen Parker, UMich
Project
7
AMP
RFA
5
AMP
2
AMP2
biosample_term_name!
naive thymus-derived CD4-positive, alpha-beta T cell
software_used.software.name!
haploview
Showing 7 of 7 results
table-tab-icon
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Download
FileSet
DSR493GNB
released
Annotation file set
: esophagus muscularis eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR817XBR
released
Annotation file set
: eQTL annotation of skeletal muscle tissue from PMID:27353450
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR259PWV
released
Annotation file set
: Genetic regulators (quantitative trait loci; QTLs) of expression (eQTLs) of human skeletal muscle from FUSION study
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR829NMX
released
Annotation file set
: Expression QTLs of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR355IUU
released
Annotation file set
: Expression QTLs of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR222BED
released
Annotation file set
: eQTL of gastrocnemius medialis(Muscle - Skeletal) for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR732DVG
released
Annotation file set
: eQTL of left ventricle myocardium for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP