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Citing CMDGA
Clear Filters
Annotation type
329
accessible chromatin
286
target gene predictions
225
gene expression
161
differential activity
58
variant allelic effects
7
binding sites
6
chromatin state
6
eQTL
2
caQTL
2
other
2
pQTL
Annotation Category
6
Genetic variant effects
Annotation type Category
6
RNA-seq
Available data
2
tsv
1
bed bed3+
File set status
6
released
Genome assembly (visualization)
4
hg19
Organism
6
Homo sapiens
Biosample type
4
tissue
2
primary cell
Biosample term
2
articular chondrocyte
2
cartilage tissue
1
kidney
1
synovial joint
Organ
4
connective tissue
1
kidney
Life stage
5
adult
Date released
4
August, 2021
2
May, 2024
Software used
3
fastqtl
3
peer
2
qTLtools
1
matrix-eQTL
Lab
AMP-T2D consortium
Stephen Parker, UMich
3
ITG
2
Doug Phanstiel, UNC
Karen Mohlke, UNC
1
Katalin Susztak, Upenn
Project
3
ITG
2
community
1
AMP
RFA
3
ITG
2
community
1
AMP2
biosample_term_name!
spinal cord
lab.title!
AMP-T2D consortium
Karen Mohlke, UNC
Stephen Parker, UMich
Showing 6 of 6 results
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FileSet
DSR602VGF
released
Annotation file set
: eQTL of primary articular chondrocytes treated with fibronectin fragment (FN-f) from 101 donors
Lab:
Doug Phanstiel, UNC
Project:
community
FileSet
DSR932ZJL
released
Annotation file set
: eQTL of primary articular chondrocytes treated with PBS from 101 donors
Lab:
Doug Phanstiel, UNC
Project:
community
FileSet
DSR474VCE
released
Annotation file set
: eQTL of synovial tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR376WYD
released
Annotation file set
: eQTL of high grade (highly degraded; lesioned) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR276XRX
released
Annotation file set
: eQTL of low-grade (intact; preserved) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP