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Citing CMDGA
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Annotation type
3
Fine-mapped variants
2
accessible chromatin
2
candidate regulatory elements
2
chromatin state
2
eQTL
2
gene expression
2
target gene predictions
1
variant allelic effects
Annotation Category
2
Genetic variant effects
Annotation type Category
2
RNA-seq
Available data
1
tsv
File set status
2
released
Genome assembly (visualization)
2
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
3
putamen
3
substantia nigra
2
amygdala
2
anterior cingulate cortex
2
brain
2
caudate nucleus
2
cerebellum
2
frontal cortex
2
hypothalamus
2
nucleus accumbens
1
Ammon's horn
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
dorsolateral prefrontal cortex
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
layer of hippocampus
1
pituitary gland
Organ
2
brain
Life stage
1
adult
Date released
1
February, 2020
1
January, 2022
Software used
1
gtex_eqtl:V8
1
qTLtools
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
month_released!
January, 2021
organ_slims!
bronchus
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Download
FileSet
DSR457BDA
released
Annotation file set
: brain frontal cortex eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR496IKQ
released
Annotation file set
: eQTL of frontal cortex for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP