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Schema
Citing CMDGA
Clear Filters
Annotation type
accessible chromatin
6
gene expression
3
differential activity
3
target gene predictions
2
binding sites
2
histone modifications
1
variant allelic effects
Annotation Category
6
Gene expression levels
Annotation type Category
3
scRNA-seq
3
single cell RNA-seq
Available data
5
tsv
3
csv
File set status
6
released
Organism
6
Homo sapiens
Biosample type
3
in vitro differentiated cells
3
primary cell
Biosample term
16
epithelial cell of proximal tubule
14
glomerular endothelial cell
13
hepatocyte
10
endothelial cell
8
EndoC_BH1
7
kidney loop of Henle thin ascending limb epithelial cell
6
pancreatic ductal cell
5
glomerular visceral epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
4
endothelial cell of hepatic sinusoid
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
Connecting Tubule Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Glomerular Capillary Endothelial Cell
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Lymphatic Endothelial Cell
3
Medullary Thick Ascending Limb Cell
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
S-shaped body
3
Transitional Principal-Intercalated Cell
3
hepatocyte(AFP)
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
2
kidney inner medulla collecting duct intercalated cell
2
pancreatic polypeptide-secreting cell
2
renal vesicle
1
breast - mammary tissue
1
cholangiocyte
1
endothelial cell of coronary artery
1
epithelial cell of distal tubule
1
esophagus - mucosa
1
intermediate endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney tubule cell
1
meso-epithelial cell
1
pancreatic alpha+beta cell
1
pancreatic cycling alpha cell
1
pancreatic endothelial cell
1
pancreatic gamma+epsilon cell
1
prostate
1
proximal tubule
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal connecting tubule
1
renal cortical epithelial cell
1
renal principal cell
1
ureteric bud
Organ
6
epithelium
6
pancreas
0
prostate gland
Life stage
3
unknown
1
adult
Date released
3
February, 2024
1
August, 2018
1
March, 2023
1
May, 2021
Software used
6
r
Lab
5
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
6
AMP
RFA
6
AMP
annotation_type!
accessible chromatin
month_released!
January, 2022
Showing 6 of 6 results
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Download
FileSet
DSR341RJP
released
Annotation file set
: Gene expression annotation of pancreatic ductal from single-cell transcriptome analysis
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR200JBD
released
Annotation file set
: Gene expression annotaion of ductal cell in phase S from single cell transcriptome profiling of hESC-derived pancreatic progenitors
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR799TOT
released
Annotation file set
: Gene expression annotaion of ductal cell in phase G2M from single cell transcriptome profiling of hESC-derived pancreatic progenitors
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR973MFR
released
Annotation file set
: Gene expression annotaion of ductal cell in phase G1 from single cell transcriptome profiling of hESC-derived pancreatic progenitors
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR178TSY
released
Annotation file set
: GSE84133 Gene expression levels (pseudobulks UMI) of pancreatic ductal cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR354ZRH
released
Annotation file set
: pancreatic ductal cell TPM gene expreassion matrix and statistic summary from scRNA-seq publications for non-diabetic adults
Lab:
AMP-T2D consortium
Project:
AMP