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Schema
Citing CMDGA
Clear Filters
Annotation type
146
candidate regulatory elements
80
target gene predictions
74
chromatin state
22
accessible chromatin
7
binding sites
7
histone modifications
6
Fine-mapped variants
5
eQTL
5
gene expression
5
variant allelic effects
2
caQTL
1
differential activity
Annotation Category
5
Gene expression levels
Annotation type Category
3
snRNA-seq
2
RNA-seq
Available data
2
tsv
File set status
5
released
Genome assembly (visualization)
3
hg19
Organism
5
Homo sapiens
Biosample type
3
primary cell
2
tissue
Biosample term
skeletal muscle fiber
1
esophagus - gastroesophageal junction
1
esophagus - muscularis
1
skeletal muscle satellite cell
1
type I muscle cell
1
type II muscle cell
Organ
245
epithelium
194
kidney
47
pancreas
42
connective tissue
34
vasculature
23
blood vessel
23
liver
13
brain
13
heart
10
adipose tissue
10
embryo
6
artery
5
musculature of body
4
bone element
3
intestine
3
lymphatic vessel
2
esophagus
2
gonad
2
large intestine
2
limb
2
skin of body
2
stomach
2
uterus
1
adrenal gland
1
blood
1
bodily fluid
1
breast
1
lung
1
lymphoid tissue
1
mouth
1
ovary
1
pituitary gland
1
prostate gland
1
spinal cord
1
spleen
1
testis
1
thyroid gland
1
tongue
1
urinary bladder
1
vagina
1
vein
Life stage
2
adult
Date released
February, 2020
3
February, 2024
2
March, 2024
Software used
5
r
3
deeptools
3
samtools
3
umitools
Lab
3
Stephen Parker, UMich
2
AMP-T2D consortium
Project
5
AMP
RFA
3
AMP2
2
AMP
annotation_type!
meQTL
biosample_term_name!
skeletal muscle fiber
month_released!
February, 2020
Showing 5 of 5 results
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Download
FileSet
DSR852SKA
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Esophagus - Muscularis.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR834CSA
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Esophagus - Gastroesophageal Junction.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR522PJU
released
Annotation file set
: Cell type gene expression mean TPM and bw of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR928HZI
released
Annotation file set
: Cell type gene expression mean TPM and bw of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR919OZT
released
Annotation file set
: Cell type gene expression mean TPM and bw of skeletal muscle satellite cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP