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Schema
Citing CMDGA
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Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
0
gene expression
Annotation Category
1
Target gene links
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
primary cell
1
in vitro differentiated cells
Biosample term
55
HeLa-S3
47
H1-hESC
23
K562
23
heart
22
stomach
21
kidney
19
A549
19
HFFc6
18
adrenal gland
18
lung
17
brain
17
small intestine
16
muscle of arm
15
placenta
14
large intestine
14
muscle of leg
14
thymus
13
left lung
13
muscle of back
12
islet of Langerhans
12
neural progenitor cell
11
adipose tissue
11
cardiomyocytes
11
hematopoietic multipotent progenitor cell
11
liver
11
right lung
10
induced pluripotent stem cell
10
pituitary stalk
10
right kidney
9
EndoC_BH1
9
extended pluripotent stem (EPS) cells
9
left kidney
9
progenitor cell of endocrine pancreas
9
renal cortex interstitium
9
renal pelvis
9
spleen
8
GM12878
8
H9
8
heart left ventricle
8
psoas muscle
8
spinal cord
7
adipocyte
7
body of pancreas
7
cardiomyocytes (cardiac muscle cell)
7
lymphocyte
7
ovary
7
sigmoid colon
6
MCF-7
6
dendritic cell
6
heart right ventricle
5
aorta
5
cardiac precursors (cardiac muscle cell)
5
gastrocnemius medialis
5
muscle of trunk
5
pancreas
5
subcutaneous adipose tissue
5
thyroid gland
5
tibial nerve
5
transverse colon
4
CyT49
4
HUES8
4
bone tissue
4
caudate nucleus
4
cerebellum
4
chorionic villus
4
coronary artery
4
endocrine pancreas
4
frontal cortex
4
iPSC derived cell line
4
mesenchymal stem cell
4
omental fat pad
4
retina
4
right atrium auricular region
4
skeletal muscle tissue
4
testis
3
Ammon's horn
3
HCT116
3
HepG2
3
Peyer's patch
3
SK-N-SH
3
ascending aorta
3
breast epithelium
3
chorion membrane
3
endometrium adenocarcinoma
3
esophagus
3
hepatocyte(AFP)
3
immortal human breast epithelial cell line cell
3
layer of hippocampus
3
mesendoderm
3
pancreatic ductal cell
3
right cardiac atrium
3
substantia nigra
3
temporal lobe
3
tibial artery
3
trophoblast
3
upper lobe of left lung
3
uterus
3
vagina
2
22Rv1
2
A673
2
BJAB cell
2
Brodmann (1909) area 46
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
H7-hESC
2
HAP-1
2
HT-29
2
IMR-90
2
Jurkat
2
KARPAS-422 cell
2
LNCaP clone FGC
2
LoVo cell
2
MCF 10A cell
2
MM.1S
2
NAMALWA cell
2
OCI-LY7
2
PC-9
2
Panc1
2
SK-N-DZ
2
T47D
2
THP-1
2
U937
2
angular gyrus
2
bipolar neuron
2
cingulate gyrus
2
colonic mucosa
2
dorsolateral prefrontal cortex
2
duodenal mucosa
2
endodermal cell
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
iPS DF 19.11
2
left cardiac atrium
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
lymphocyte of B lineage (iPSC)
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
occipital lobe
2
parathyroid adenoma
2
prostate gland
2
putamen
2
right lobe of liver
2
right renal cortex interstitium
2
right renal pelvis
2
smooth muscle cell
2
stomach smooth muscle
2
thoracic aorta
2
tongue
2
trophoblast cell
2
urinary bladder
2
visceral abdominal adipose tissue
1
8988T
1
A172
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
B-lymphoblastoid cell line
1
BE(2)-C
1
BJ cell
1
C1 segment of cervical spinal cord
1
C4-2B
1
CMK
1
COLO829
1
CWRU1
1
Caco-2 cell
1
Caki2
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
G401
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM08714
1
GM10248
1
GM10266
1
GM12864
Organ
1
epithelium
1
liver
Life stage
1
embryonic
Date released
1
September, 2022
Software used
1
r
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
biosample_type!
primary cell
month_released!
August, 2018
Showing 1 of 1 results
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Download
FileSet
DSR926ULW
released
Annotation file set
: Target gene predictions for BSS00556 hepatocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP