Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
15
accessible chromatin
6
chromatin state
3
binding sites
2
candidate regulatory elements
2
histone modifications
2
target gene predictions
1
gene expression
Annotation Category
2
cis-regulatory elements
1
Gene expression levels
Annotation type Category
2
ChIP-seq
1
RNA-seq
Available data
2
bed bed3+
1
tsv
File set status
3
released
Genome assembly (visualization)
2
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
cell line
1
in vitro differentiated cells
Biosample term
101
monocyte
33
CD8-positive, alpha-beta T cell
23
neural progenitor cell
17
hepatocyte
16
epithelial cell of proximal tubule
14
glomerular endothelial cell
12
islet of Langerhans
11
cardiomyocytes
11
endothelial cell
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
kidney
9
progenitor cell of endocrine pancreas
8
pancreatic ductal cell
8
regulatory T cell
7
T-helper 1 cell
7
T-helper 17 cell
7
kidney loop of Henle thin ascending limb epithelial cell
6
kidney interstitial cell
6
neuroblastoma cell line
5
T-cell acute lymphoblastic leukemia
5
glomerular visceral epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
5
subcutaneous adipose tissue
4
B cell
4
bone tissue
4
brain
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
endothelial cell of hepatic sinusoid
4
gamma-delta T cell
4
heart
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
natural killer cell
4
nephron progenitor
4
osteoblast
4
rhabdomyosarcoma cell
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
B Cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Fibroblast
3
Glomerular Capillary Endothelial Cell
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
S-shaped body
3
T Cell
3
T-helper 2 cell
3
Transitional Principal-Intercalated Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
adipocyte
3
adipose tissue
3
adult endothelial progenitor cell
3
central memory CD8-positive, alpha-beta T cell
3
cerebellum
3
effector memory CD8-positive, alpha-beta T cell
3
hepatocyte(AFP)
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
liver
3
mammary epithelial cell
3
memory B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neuronal stem cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
3
pancreatic ductal adenocarcinoma
2
Kupffer cell
2
T follicular helper cell
2
Th1 cell
2
acute myeloid leukemia cell
2
amygdala
2
astrocyte
2
body of pancreas
2
caudate nucleus
2
colon adenocarcinoma
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
embryonic stem cell
2
endometriosis
2
erythroid progenitor cell
2
esophageal adenocarcinoma
2
foreskin fibroblast
2
frontal cortex
2
heart left ventricle
2
hematopoietic multipotent progenitor cell
2
hepatic stellate cell
2
hypothalamus
2
keratinocyte
2
kidney inner medulla collecting duct intercalated cell
2
leukocyte
2
macrophage
2
mantle cell lymphoma cell
2
mast cell
2
mature natural killer cell
2
medulloblastoma cell line
2
memory T cell
2
memory regulatory T cell
2
mesenchymal stem cell
2
meso-epithelial cell
2
naive B cel
2
nucleus accumbens
2
occipital lobe
2
omental fat pad
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
placenta
2
plasma cell
2
pre-B acute lymphoblastic leukemia cell
2
preadipocyte
prostate gland
2
putamen
2
renal vesicle
2
retina
2
right atrium auricular region
2
skeletal muscle fiber
2
skeletal muscle myoblast
2
skeletal muscle satellite cell
2
skeletal muscle tissue
2
smooth muscle cell
2
stomach
2
substantia nigra
2
temporal lobe
2
testis
2
tibial nerve
2
tracheal epithelial cell
2
vascular associated smooth muscle cell
2
visceral abdominal adipose tissue
1
Adipose stromal cell
1
Ammon's horn
1
B-1 B cell
1
B-1a B cell
1
B-2 B cell
1
B-cell lymphoma cell
1
B-lymphocyte
1
BICR 31
1
Barrett's epithelial cell line
1
Brodmann (1909) area 9
1
C1 segment of cervical spinal cord
1
CD1c-positive myeloid dendritic cell
1
CD34-positive, CD38-negative hematopoietic stem cell
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
1
CD4-positive helper T cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD8-Positive T-Lymphocytes
Organ
1
epithelium
1
eye
Date released
2
February, 2021
1
May, 2021
Software used
2
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
prostate gland
biosample_type!
cell line
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR740DPX
released
Annotation file set
: Gene expression annotation of embryonic stem cell Undifferentiated ES cell from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR134CON
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell Embryonic_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR474DDE
released
Annotation file set
: Histone modifications annotation for Neural HRPEpiC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP