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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
16
chromatin state
14
target gene predictions
3
accessible chromatin
2
histone modifications
1
binding sites
1
gene expression
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
1
Gene expression levels
Annotation type Category
2
ChIP-seq
1
scRNA-seq
Available data
2
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
hg19
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Biosample term
101
monocyte
32
CD8-positive, alpha-beta T cell
23
neural progenitor cell
15
epithelial cell of proximal tubule
13
glomerular endothelial cell
12
hepatocyte
12
islet of Langerhans
11
breast cancer cell
11
cardiomyocytes
10
progenitor cell of endocrine pancreas
9
EndoC_BH1
9
H1-hESC
9
extended pluripotent stem (EPS) cells
9
gastric cancer cell
9
induced pluripotent stem cell
8
Rhabdomyosarcoma
8
neuroblastoma cell
8
regulatory T cell
7
T-helper 1 cell
7
diffuse intrinsic pontine glioma
7
endothelial cell
7
esophageal adenocarcinoma
7
kidney loop of Henle thin ascending limb epithelial cell
7
pancreatic ductal cell
6
B-lymphoblastoid cell line
6
Chondroid Chordoma
6
T-helper 17 cell
6
hESC cell
6
kidney interstitial cell
6
liposarcoma
6
neuroblastoma cell line
6
squamous cell lung carcinoma
5
HepG2
5
T-cell acute lymphoblastic leukemia
5
glomerular visceral epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
melanoma cell
5
mesangial cell
5
osteosarcoma
4
B cell
4
bone tissue
4
brain
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
gamma-delta T cell
4
heart
4
nephron progenitor
4
osteoblast
4
rhabdomyosarcoma cell
4
subcutaneous adipose tissue
3
Ewing sarcoma
3
S-shaped body
3
T-helper 2 cell
3
acute myeloid leukemia
3
adipose tissue
3
adult endothelial progenitor cell
3
central memory CD8-positive, alpha-beta T cell
3
cerebellum
3
diffuse large B-cell lymphoma
3
effector memory CD8-positive, alpha-beta T cell
3
embryonic stem cell
3
esophageal squamous cell carcinoma
3
glioblastoma cell
3
glioma cell
3
hepatic stellate cell
3
hepatocyte(AFP)
3
keratinocyte
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
liver
3
lymphoblast
3
lymphoblastoid cell line
3
mammary epithelial cell
3
memory B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
natural killer cell
3
neuronal stem cell
3
pancreatic acinar cell
3
pancreatic ductal adenocarcinoma
3
smooth muscle cell of the coronary artery
2
B-lymphocyte
2
COLO205
2
HS-SY-2 cell
2
Jurkat
2
Kupffer cell
2
MCF-7
2
Mantle cell lymphoma
2
RS4-11 cell
2
Rh-4 cell
2
T follicular helper cell
2
Th1 cell
2
acute myeloid leukemia cell
2
adipocyte
2
amygdala
2
astrocyte
2
body of pancreas
2
bronchial epithelial cell
2
cardiac muscle cell
2
caudate nucleus
2
chronic lymphocytic leukemia
2
colon adenocarcinoma
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
endometriosis
2
epithelial ovarian cancer cell
2
erythroid progenitor cell
2
esophageal carcinoma
2
fibroblast
2
fibroblast of cardiac tissue
2
foreskin fibroblast
2
frontal cortex
2
glioblastoma multiforme cancer stem cell
2
heart left ventricle
2
hematopoietic cell
2
hematopoietic multipotent progenitor cell
2
hypothalamus
2
immortal foreskin-derived fibroblast cell line cell
2
immortal neural cell line cell
2
kidney
2
kidney inner medulla collecting duct intercalated cell
2
leukemic stem cell
2
macrophage
2
mantle cell lymphoma cell
2
mast cell
2
mature natural killer cell
2
medulloblastoma cell line
2
memory T cell
2
memory regulatory T cell
2
meso-epithelial cell
2
metastatic melanoma
2
multiple myeloma cell line
2
naive B cel
2
nucleus accumbens
2
occipital lobe
2
omental fat pad
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic cell line
2
pancreatic delta cell
2
pancreatic polypeptide-secreting cell
2
placenta
2
plasma cell
2
pre-B acute lymphoblastic leukemia cell
2
preadipocyte
2
prostate gland
2
putamen
2
renal vesicle
2
retina
2
right atrium auricular region
2
skeletal muscle myoblast
2
skeletal muscle tissue
2
stomach
2
substantia nigra
2
synovial sarcoma cell
2
temporal lobe
2
testis
2
tibial nerve
2
tracheal epithelial cell
2
triple-negative breast cancer
2
umbilical cord mesenchymal stem cell line cell
2
urinary bladder cancer cell
2
vascular associated smooth muscle cell
2
visceral abdominal adipose tissue
1
143B
1
22Rv1
1
501A
1
5637
1
697 cell
1
769-P cell
1
76NF2V cell
1
786-O cell
1
A-1847 cell
1
A-375 cell
1
A-498 cell
1
A-673 cell
1
A549
1
AG04449 cell
1
AG04450 cell
1
AG08470 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AGS cell
1
ALL-SIL cell
1
ARH-77 cell
1
AU565 cell
1
Adipose stromal cell
1
Ammon's horn
1
AsPC-1 cell
1
B-1a B cell
1
B-cell lymphoma cell
1
BCBL-1 cell
1
BE(2)-C
Organ
2
kidney
Date released
2
February, 2021
1
August, 2018
Software used
2
macs
1
r
Lab
7
Katalin Susztak, Upenn
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR007RUJ
released
Annotation file set
: Histone modifications annotation for Kidney Nephrectomy_sample from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR761JKG
released
Annotation file set
: Histone modifications annotation for Kidney Kidney from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR533INC
released
Annotation file set
: islet of Langerhans TPM gene expreassion matrix and statistic summary from scRNA-seq publications for non-diabetic adults
Lab:
AMP-T2D consortium
Project:
AMP