Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
4
target gene predictions
3
accessible chromatin
3
chromatin state
1
binding sites
1
caQTL
1
eQTL
1
gene expression
1
histone modifications
Annotation Category
1
Gene expression levels
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
snRNA-seq
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
in vitro differentiated cells
1
primary cell
Biosample term
5
mesangial cell
5
subcutaneous adipose tissue
4
bone tissue
4
osteoblast
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Fibroblast
3
Mesangial Cell
3
adipocyte
3
adipose tissue
3
adult endothelial progenitor cell
3
hepatic stellate cell
2
fibroblast
2
fibroblast of cardiac tissue
2
foreskin fibroblast
2
mesenchymal stem cell
2
omental fat pad
2
pancreatic stellate cell
2
preadipocyte
2
visceral abdominal adipose tissue
1
GM23248
1
activated pancreatic stellate cell
1
adipose tissue derived mesenchymal stem cell
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac ventricle fibroblast
1
cartilage tissue
1
chondrocyte
1
columnar chondrocyte
1
embryonic fibroblast
1
fibroblast of mammary gland
1
fibroblast of pulmonary artery
1
fibroblast of villous mesenchyme
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
pulmonary interstitial fibroblast
1
quiescent pancreatic stellate cell
1
skin fibroblast
Organ
2
connective tissue
Date released
1
February, 2021
1
February, 2024
Software used
1
deeptools
1
macs
1
r
1
samtools
1
umitools
Lab
1
AMP-T2D consortium
1
Stephen Parker, UMich
Project
2
AMP
RFA
1
AMP
1
AMP2
organ_slims!
kidney
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR337GCY
released
Annotation file set
: Histone modifications annotation for Others Mesenchymal_stem_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR543XVO
released
Annotation file set
: Cell type gene expression mean TPM and bw of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP