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Citing CMDGA
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Annotation type
1
binding sites
1
gene expression
1
histone modifications
Annotation Category
1
Gene expression levels
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
scRNA-seq
Available data
1
bed bed3+
1
tsv
File set status
2
released
Genome assembly (visualization)
1
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
101
monocyte
33
CD8-positive, alpha-beta T cell
17
hepatocyte
16
epithelial cell of proximal tubule
14
glomerular endothelial cell
10
endothelial cell
8
regulatory T cell
7
T-helper 1 cell
7
T-helper 17 cell
7
kidney loop of Henle thin ascending limb epithelial cell
6
kidney interstitial cell
5
glomerular visceral epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
5
pancreatic ductal cell
4
endothelial cell of hepatic sinusoid
4
gamma-delta T cell
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
nephron progenitor
4
osteoblast
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
B Cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Fibroblast
3
Glomerular Capillary Endothelial Cell
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
S-shaped body
3
T Cell
3
T-helper 2 cell
3
Transitional Principal-Intercalated Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
adult endothelial progenitor cell
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
mammary epithelial cell
3
memory B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
natural killer cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
2
B cell
2
Kupffer cell
2
T follicular helper cell
2
acute myeloid leukemia cell
2
astrocyte
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
foreskin fibroblast
2
hepatic stellate cell
2
keratinocyte
2
kidney inner medulla collecting duct intercalated cell
2
leukocyte
2
macrophage
2
mantle cell lymphoma cell
2
mast cell
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
meso-epithelial cell
2
naive B cel
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
plasma cell
2
pre-B acute lymphoblastic leukemia cell
2
preadipocyte
2
renal vesicle
2
skeletal muscle fiber
2
skeletal muscle myoblast
2
skeletal muscle satellite cell
2
tracheal epithelial cell
2
vascular associated smooth muscle cell
1
Adipose stromal cell
1
B-1 B cell
1
B-1a B cell
1
B-2 B cell
1
B-cell lymphoma cell
1
B-lymphocyte
1
CD1c-positive myeloid dendritic cell
1
CD34-positive, CD38-negative hematopoietic stem cell
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
Ishikawa
1
Rhabdoid Tumor of the Kidney
1
Schwann cell
1
Stromal Predominant Kidney Wilms Tumor
1
T-cell lymphoma cell
1
Th1 cell
1
Th17 cell
1
activated pancreatic stellate cell
1
acute myeloid leukemia
1
adipocyte
1
alpha-beta T cell
1
alternatively activated macrophage
1
alveolar cell type II
1
aortic adventitial fibroblast
1
aortic endothelial cell
1
bone cell
1
bone marrow cell
1
bronchial epithelial cell
1
cardiac atrium fibroblast
1
cardiac muscle myoblast
1
cardiac ventricle fibroblast
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
cholangiocyte
1
chronic lymphocytic leukemia cell
1
columnar chondrocyte
1
cytotoxic T cell
1
dendritic cell
1
effector CD8-positive, alpha-beta T cell
1
effector memory CD4-positive, alpha-beta T cell
1
embryonic stem cell
1
endothelial cell of coronary artery
1
epithelial cell of distal tubule
1
erythroid cell
1
erythroid lineage cell
1
erythroid progenitor cell
1
fibroblast of mammary gland
1
fibroblast of pulmonary artery
1
fibroblast of villous mesenchyme
1
glial cell
1
granulocyte
1
head and neck neoplasia
1
head and neck squamous cell carcinoma
1
inflammatory macrophage
1
intestinal epithelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney tubule cell
1
leukemic stem cell
1
mature B cell
1
mature neutrophil
1
meningioma cell
1
mesenchymal cell
1
mesenchymal stem cell
1
mesenchymal stem cell of adipose
1
mononuclear cell of bone marrow
Organ
2
epithelium
Life stage
1
fetal
Date released
2
February, 2021
Software used
1
macs
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
Degenerative Principal Cell
organ_slims!
large intestine
Showing 2 of 2 results
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Download
FileSet
DSR324HID
released
Annotation file set
: Histone modifications annotation for Breast NAMEC8 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR879UYD
released
Annotation file set
: Gene expression levels (pseudobulks UMIs) of PTA from GSE114530 scRNAseq fetal kidney
Lab:
AMP-T2D consortium
Project:
AMP