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Schema
Citing CMDGA
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Annotation type
8
candidate regulatory elements
7
target gene predictions
4
chromatin state
2
accessible chromatin
1
eQTL
0
gene expression
Annotation Category
7
Target gene links
Annotation type Category
5
DNase-seq
4
ChIP-seq
2
ATAC-seq
1
H3K27ac ChIP-Seq
1
pCHi-C
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
1
GRCh38
Organism
7
Homo sapiens
Biosample type
6
tissue
1
primary cell
Biosample term
6
ovary
1
luteal cell
Organ
373
epithelium
275
kidney
127
connective tissue
94
brain
94
embryo
92
pancreas
89
musculature of body
78
lung
73
intestine
70
heart
66
vasculature
58
uterus
55
bodily fluid
53
blood
53
limb
49
blood vessel
45
liver
44
large intestine
44
skin of body
36
extraembryonic component
30
stomach
26
adipose tissue
23
small intestine
21
adrenal gland
20
bone element
19
mammary gland
17
placenta
16
artery
15
prostate gland
14
thymus
13
ureter
11
gonad
11
penis
10
esophagus
10
eye
10
pituitary gland
10
spinal cord
9
lymph node
8
spleen
7
ovary
6
lymphatic vessel
6
lymphoid tissue
6
thyroid gland
5
nerve
4
mouth
4
testis
4
vein
3
bone marrow
3
breast
3
bronchus
3
skeleton
3
urinary bladder
2
tongue
2
vagina
1
nose
1
pericardium
Life stage
3
adult
1
embryonic
Date released
4
September, 2022
1
March, 2020
March, 2024
1
May, 2021
1
November, 2021
Software used
4
r
2
abc
1
nospecificsoft_customcode
Lab
5
AMP-T2D consortium
1
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
6
AMP
1
ENCODE
RFA
6
AMP
1
ENCODE3
biosample_term_name!
HAP-1
month_released!
March, 2024
Showing 7 of 7 results
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Download
FileSet
DSR249ZSK
released
Annotation file set
: Target gene predictions for BSS01403 ovary from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR789MNT
released
Annotation file set
: Target gene predictions for BSS01402 ovary from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR594TVG
released
Annotation file set
: Target gene predictions for BSS01401 ovary from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR097PMM
released
Annotation file set
: Target gene predictions for BSS01399 ovary from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR246QUC
released
Annotation file set
: Target gene predictions of Luteal Cell (Ovarian) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR547QBE
released
Annotation file set
: enhancer-gene predicton of ovary-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR751JBO
released
Annotation file set
: A target gene prediction annotation in Human Ovary of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP