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Schema
Citing CMDGA
Clear Filters
Annotation type
8
candidate regulatory elements
7
target gene predictions
4
chromatin state
2
accessible chromatin
1
eQTL
1
gene expression
Annotation Category
7
Target gene links
1
Gene expression levels
Annotation type Category
5
DNase-seq
4
ChIP-seq
2
ATAC-seq
1
H3K27ac ChIP-Seq
1
RNA-seq
1
pCHi-C
Available data
7
bed bed3+
1
tsv
File set status
8
released
Genome assembly (visualization)
7
hg19
1
GRCh38
Organism
8
Homo sapiens
Biosample type
7
tissue
1
primary cell
Biosample term
7
ovary
1
luteal cell
Organ
375
epithelium
277
kidney
127
connective tissue
95
brain
94
embryo
92
pancreas
91
musculature of body
79
lung
76
intestine
70
heart
67
vasculature
60
uterus
56
bodily fluid
54
blood
54
limb
50
blood vessel
46
large intestine
46
skin of body
45
liver
36
extraembryonic component
32
stomach
26
adipose tissue
23
small intestine
22
adrenal gland
20
bone element
19
mammary gland
17
placenta
16
artery
16
prostate gland
14
thymus
13
gonad
13
ureter
12
esophagus
11
penis
11
pituitary gland
10
eye
10
spinal cord
9
lymph node
9
spleen
8
ovary
7
lymphoid tissue
7
thyroid gland
6
lymphatic vessel
5
mouth
5
nerve
testis
5
vein
4
breast
4
urinary bladder
3
bone marrow
3
bronchus
3
skeleton
3
tongue
3
vagina
1
nose
1
pericardium
Life stage
4
adult
1
embryonic
Date released
4
September, 2022
1
March, 2020
1
March, 2024
1
May, 2021
1
November, 2021
Software used
5
r
2
abc
1
nospecificsoft_customcode
Lab
6
AMP-T2D consortium
1
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
7
AMP
1
ENCODE
RFA
7
AMP
1
ENCODE3
biosample_term_name!
HAP-1
organ_slims!
testis
Showing 8 of 8 results
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Download
FileSet
DSR029CFN
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Ovary.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR249ZSK
released
Annotation file set
: Target gene predictions for BSS01403 ovary from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR789MNT
released
Annotation file set
: Target gene predictions for BSS01402 ovary from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR594TVG
released
Annotation file set
: Target gene predictions for BSS01401 ovary from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR097PMM
released
Annotation file set
: Target gene predictions for BSS01399 ovary from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR246QUC
released
Annotation file set
: Target gene predictions of Luteal Cell (Ovarian) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR547QBE
released
Annotation file set
: enhancer-gene predicton of ovary-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR751JBO
released
Annotation file set
: A target gene prediction annotation in Human Ovary of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP