Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
5
target gene predictions
4
binding sites
3
candidate regulatory elements
3
chromatin state
3
histone modifications
2
accessible chromatin
1
variant allelic effects
0
gene expression
Annotation Category
5
Target gene links
Annotation type Category
3
ATAC-seq
3
DNase-seq
2
ChIP-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
55
HeLa-S3
47
H1-hESC
23
K562
23
heart
22
stomach
21
kidney
19
A549
19
CD14-positive monocyte
19
HFFc6
18
adrenal gland
18
lung
18
monocyte
17
brain
17
endothelial cell
17
epithelial cell of proximal tubule
17
hepatocyte
17
small intestine
16
muscle of arm
15
glomerular endothelial cell
15
placenta
14
common myeloid progenitor, CD34-positive
14
large intestine
14
muscle of leg
14
thymus
13
left lung
13
muscle of back
12
B cell
12
islet of Langerhans
12
neural progenitor cell
11
adipose tissue
11
cardiomyocytes
11
hematopoietic multipotent progenitor cell
11
liver
11
regulatory T cell
11
right lung
10
T-helper 1 cell
10
T-helper 17 cell
10
induced pluripotent stem cell
10
pericyte cell
10
pituitary stalk
10
right kidney
9
CD4-positive, alpha-beta memory T cell
9
EndoC_BH1
9
extended pluripotent stem (EPS) cells
9
left kidney
9
pancreatic ductal cell
9
progenitor cell of endocrine pancreas
9
renal cortex interstitium
9
renal pelvis
9
smooth muscle cell
9
spleen
8
CD8-positive, alpha-beta T cell
8
GM12878
8
H9
8
adipocyte
8
heart left ventricle
8
psoas muscle
8
spinal cord
7
CD8-positive, alpha-beta memory T cell
7
body of pancreas
7
cardiomyocytes (cardiac muscle cell)
7
dendritic cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
lymphocyte
7
natural killer cell
7
ovary
7
pancreatic delta cell
7
sigmoid colon
7
trophoblast cell
6
MCF-7
6
T-helper 2 cell
6
glomerular visceral epithelial cell
6
heart right ventricle
6
kidney interstitial cell
6
macrophage
6
mononuclear cell
6
olfactory receptor cell
6
pancreatic acinar cell
6
pancreatic alpha cell
6
pancreatic beta cell
5
aorta
5
astrocyte
5
cardiac precursors (cardiac muscle cell)
5
gastrocnemius medialis
5
keratinocyte
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
memory B cell
5
mesangial cell
5
mesenchymal stem cell
5
muscle of trunk
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
pancreas
5
subcutaneous adipose tissue
5
thyroid gland
5
tibial nerve
5
transverse colon
4
CyT49
4
HUES8
4
T cell
4
adult endothelial progenitor cell
4
bone tissue
4
caudate nucleus
4
cerebellum
4
chorionic villus
4
colon epithelial cell
4
coronary artery
4
endocrine pancreas
4
endothelial cell of hepatic sinusoid
4
endothelial cell of umbilical vein
4
fibroblast
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin keratinocyte
4
frontal cortex
4
gamma-delta T cell
4
iPSC derived cell line
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
mammary gland epithelial cell
4
nephron progenitor
4
omental fat pad
4
osteoblast
4
retina
4
right atrium auricular region
4
skeletal muscle myoblast
4
skeletal muscle satellite cell
4
skeletal muscle tissue
4
testis
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
Ammon's horn
3
B Cell
3
CD4-positive, alpha-beta T cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Fibroblast
3
Glomerular Capillary Endothelial Cell
3
HCT116
3
HepG2
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Peyer's patch
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
S-shaped body
3
SK-N-SH
3
T Cell
3
Transitional Principal-Intercalated Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
ascending aorta
3
breast epithelium
3
central memory CD8-positive, alpha-beta T cell
3
chorion membrane
3
effector memory CD8-positive, alpha-beta T cell
3
endometrium adenocarcinoma
Organ
5
epithelium
5
skin of body
Life stage
2
unknown
Date released
2
November, 2021
2
September, 2022
1
May, 2021
Software used
3
abc
2
r
Lab
2
AMP-T2D consortium
2
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
3
AMP
2
ENCODE
RFA
3
AMP
2
ENCODE3
biosample_term_name!
HAP-1
disease_term_name!
acute lymphoblastic leukemia
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR125EUW
released
Annotation file set
: Target gene predictions for BSS01071 keratinocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR555IYR
released
Annotation file set
: Target gene predictions for BSS01068 keratinocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR681TKD
released
Annotation file set
: Target gene predictions of Keratinocyte 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR385FIQ
released
Annotation file set
: Target gene predictions of Keratinocyte 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR926EGV
released
Annotation file set
: enhancer-gene predicton of keratinocyte-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP