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Schema
Citing CMDGA
Clear Filters
Annotation type
75
candidate regulatory elements
target gene predictions
35
chromatin state
18
binding sites
13
histone modifications
8
accessible chromatin
3
eQTL
2
gene expression
1
variant allelic effects
Annotation Category
2
Gene expression levels
1
Genetic variant effects
Annotation type Category
2
RNA-seq
1
snATAC-seq
Available data
2
tsv
1
bed bed3+
File set status
3
released
Genome assembly (visualization)
1
hg19
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Biosample term
1
keratinocyte
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
Organ
179
epithelium
115
kidney
59
pancreas
53
connective tissue
36
brain
31
heart
26
vasculature
19
liver
18
blood vessel
16
adipose tissue
13
limb
13
musculature of body
10
embryo
9
artery
6
intestine
4
bone element
4
esophagus
4
nerve
4
stomach
3
eye
3
skin of body
3
ureter
2
adrenal gland
2
gonad
2
large intestine
2
lung
2
prostate gland
2
thyroid gland
2
uterus
2
vein
1
blood
1
bodily fluid
1
breast
1
bronchus
1
lymphoid tissue
1
mammary gland
1
mouth
1
ovary
1
pericardium
1
pituitary gland
1
spinal cord
1
spleen
1
testis
1
tongue
1
urinary bladder
1
vagina
Life stage
2
adult
Date released
2
March, 2024
1
February, 2024
Software used
2
r
1
deltasvm
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Project
3
AMP
RFA
3
AMP
annotation_type!
target gene predictions
Showing 3 of 3 results
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Download
FileSet
DSR956YKF
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Skin - Sun Exposed (Lower leg).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR738ZFY
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Skin - Not Sun Exposed (Suprapubic).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR684JHV
released
Annotation file set
: Variant allelic effects annotation of Keratinocytes from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP