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Schema
Citing CMDGA
Clear Filters
Annotation type
51
candidate regulatory elements
30
target gene predictions
24
chromatin state
8
accessible chromatin
2
gene expression
2
variant allelic effects
1
eQTL
1
histone modifications
Annotation Category
2
Gene expression levels
2
Genetic variant effects
Annotation type Category
2
RNA-seq
2
snATAC-seq
Available data
2
bed bed3+
2
tsv
File set status
4
released
Genome assembly (visualization)
2
hg19
Organism
4
Homo sapiens
Biosample type
2
primary cell
2
tissue
Biosample term
1
esophagus - gastroesophageal junction
1
parietal cell
1
peptic cell
1
stomach
Organ
276
epithelium
218
kidney
64
connective tissue
50
vasculature
41
pancreas
36
brain
33
blood vessel
31
heart
27
liver
18
musculature of body
16
adipose tissue
13
limb
12
artery
10
embryo
6
intestine
4
bone element
4
esophagus
4
nerve
4
stomach
3
eye
3
lymphatic vessel
3
skin of body
3
ureter
2
adrenal gland
2
gonad
2
large intestine
2
lung
2
prostate gland
2
thyroid gland
2
uterus
2
vein
1
blood
1
bodily fluid
1
breast
1
bronchus
1
lymphoid tissue
1
mammary gland
1
mouth
1
ovary
1
pericardium
1
pituitary gland
1
spinal cord
1
spleen
1
testis
1
tongue
1
urinary bladder
1
vagina
Life stage
2
adult
Date released
2
February, 2024
2
March, 2024
Software used
2
deltasvm
2
r
Lab
2
AMP-T2D consortium
2
Bing Ren, UCSD
Project
4
AMP
RFA
4
AMP
biosample_term_name!
EndoC_BH1
month_released!
March, 2023
Showing 4 of 4 results
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Download
FileSet
DSR007TCR
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Stomach.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR834CSA
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Esophagus - Gastroesophageal Junction.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR855UCF
released
Annotation file set
: Variant allelic effects annotation of Parietal cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR552HSG
released
Annotation file set
: Variant allelic effects annotation of Gastric chief cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP