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Schema
Citing CMDGA
Clear Filters
Annotation type
75
candidate regulatory elements
44
target gene predictions
35
chromatin state
18
binding sites
13
accessible chromatin
13
histone modifications
3
eQTL
2
gene expression
1
variant allelic effects
Annotation Category
2
Gene expression levels
1
Genetic variant effects
Annotation type Category
2
RNA-seq
1
snATAC-seq
Available data
2
tsv
1
bed bed3+
File set status
3
released
Genome assembly (visualization)
1
hg19
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Biosample term
1
keratinocyte
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
Organ
294
epithelium
218
kidney
62
connective tissue
59
pancreas
51
vasculature
36
brain
34
blood vessel
30
heart
28
liver
18
musculature of body
16
adipose tissue
13
limb
12
artery
10
embryo
6
intestine
4
bone element
4
esophagus
4
nerve
4
stomach
3
eye
3
lymphatic vessel
3
skin of body
3
ureter
2
adrenal gland
2
gonad
2
large intestine
2
lung
2
prostate gland
2
thyroid gland
2
uterus
2
vein
1
blood
1
bodily fluid
1
breast
1
bronchus
1
lymphoid tissue
1
mammary gland
1
mouth
1
ovary
1
pericardium
1
pituitary gland
1
spinal cord
1
spleen
1
testis
1
tongue
1
urinary bladder
1
vagina
Life stage
2
adult
Date released
2
March, 2024
1
February, 2024
Software used
2
r
1
deltasvm
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Project
3
AMP
RFA
3
AMP
biosample_term_name!
Fibroblast
pulmonary valve
Showing 3 of 3 results
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Download
FileSet
DSR956YKF
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Skin - Sun Exposed (Lower leg).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR738ZFY
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Skin - Not Sun Exposed (Suprapubic).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR684JHV
released
Annotation file set
: Variant allelic effects annotation of Keratinocytes from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP