Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
37
candidate regulatory elements
21
chromatin state
20
target gene predictions
5
accessible chromatin
3
gene expression
2
variant allelic effects
1
binding sites
1
histone modifications
Annotation Category
3
Gene expression levels
2
Genetic variant effects
Annotation type Category
2
DNase-seq
2
RNA-seq
1
scRNA-seq
Available data
3
tsv
2
bed bed3+
File set status
5
released
Genome assembly (visualization)
2
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
16
epithelial cell of proximal tubule
15
monocyte
14
glomerular endothelial cell
12
islet of Langerhans
11
cardiomyocytes
9
EndoC_BH1
9
extended pluripotent stem (EPS) cells
9
hepatocyte
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
8
H1-hESC
7
T-helper 1 cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
neural progenitor cell
7
regulatory T cell
6
T-helper 17 cell
6
endothelial cell
6
glomerular visceral epithelial cell
6
kidney interstitial cell
5
cardiac precursors (cardiac muscle cell)
5
cardiomyocytes (cardiac muscle cell)
5
heart
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
5
pancreatic ductal cell
5
subcutaneous adipose tissue
4
adipose tissue
4
bone tissue
4
gamma-delta T cell
4
nephron progenitor
4
right atrium auricular region
4
tibial nerve
3
S-shaped body
3
T-helper 2 cell
3
adult endothelial progenitor cell
3
body of pancreas
3
central memory CD8-positive, alpha-beta T cell
3
coronary artery
3
effector memory CD8-positive, alpha-beta T cell
3
frontal cortex
3
heart left ventricle
3
hepatocyte(AFP)
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
memory B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
tibial artery
2
cardiac fibroblast
2
muscle of leg
2
B cell
2
CD8-positive, alpha-beta T cell
2
Kupffer cell
2
MIN6
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
T follicular helper cell
2
ascending aorta
2
brain
2
caudate nucleus
2
cerebellum
2
cerebellum (Hemisphere)
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
heart right ventricle
2
hepatic stellate cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
kidney inner medulla collecting duct intercalated cell
2
left cardiac atrium
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
naive B cel
2
occipital lobe
2
omental fat pad
2
osteoblast
2
pancreatic acinar cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic delta cell
2
pancreatic polypeptide-secreting cell
2
putamen
2
renal cortical epithelial cell
2
renal vesicle
2
retina
2
skeletal muscle myoblast
2
smooth muscle cell of the coronary artery
2
vascular associated smooth muscle cell
2
visceral abdominal adipose tissue
1
brain microvascular endothelial cell
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
retinal pigment epithelial cell
1
Adipose SGBS cell line (adipocyte)
1
Ammon's horn
1
B-1a B cell
1
C1 segment of cervical spinal cord
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
Preadipose SGBS cell line (adipocyte)
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
Schwann cell
1
activated pancreatic stellate cell
1
adipocyte
1
adrenal gland
1
alpha-beta T cell
1
amygdala
1
anterior cingulate cortex
1
aorta
1
aortic valve
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
bladder
1
brain pericyte
1
breast - mammary tissue
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac muscle cell
1
cardiac muscle cell (pacemaker cell)
1
cardiac ventricle fibroblast
1
cells - EBV-transformed lymphocytes
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
cervix - ectocervix
1
cervix - endocervix
1
cholangiocyte
1
choroid plexus epithelial cell
1
colon - sigmoid
1
colon - transverse
1
cytotoxic T cell
1
diencephalon
1
dorsolateral prefrontal cortex
1
effector memory CD4-positive, alpha-beta T cell
1
embryonic stem cell
1
endothelial cell of coronary artery
1
endothelial cell of umbilical vein
1
epithelial cell of distal tubule
1
erythroid lineage cell
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
excitatory neuron
1
fallopian tube
1
gastrocnemius medialis(Muscle - Skeletal)
1
globus pallidus
1
hematopoietic multipotent progenitor cell
1
hippocampal neuron
1
hypothalamus
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
kidney
1
kidney - cortex
1
kidney - medulla
1
kidney capillary endothelial cell
1
kidney tubule cell
1
left renal cortex interstitium
1
left renal pelvis
1
left ventricle myocardium
1
leukocyte
1
liver
1
lower motor neuron
1
lung
1
macrophage
1
mast cell
1
mature B cell
1
medulla oblongata
1
mesenchymal cell
1
mesenchymal stem cell of adipose
1
meso-epithelial cell
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
metanephros
1
midbrain
1
middle frontal gyrus
1
minor salivary gland
1
mitral valve
1
muscle of arm
1
myeloid dendritic cell
1
naive B cell
1
naive regulatory T cell
1
naive t cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
natural killer cell
1
nucleus accumbens
1
ovary
1
pancreas
1
pancreatic cell
1
pancreatic epsilon cell
Organ
5
heart
Life stage
2
fetal
1
adult
1
embryonic
Date released
2
May, 2020
1
August, 2021
1
February, 2020
1
February, 2021
Software used
3
r
2
deltasvm
Lab
5
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
5
AMP
RFA
5
AMP
biosample_term_name!
heart right ventricle
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR321UPS
released
Annotation file set
: Gene expression annotation of heart left ventricle from single-cell transcriptome analysis map the developmental track of the human heart
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR384FIT
released
Annotation file set
: Gene expression of heart (atria and ventricle)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR480PRT
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart child DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR799HGW
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR670YAY
released
Annotation file set
: Gene expression levels of Heart fetal from RNA-seq (GSE63634) + RNA-seq (ENCODE) + RNA-seq (GSE106690)
Lab:
AMP-T2D consortium
Project:
AMP