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Citing CMDGA
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Annotation type
11
candidate regulatory elements
8
chromatin state
7
target gene predictions
2
accessible chromatin
2
variant allelic effects
1
eQTL
1
gene expression
1
histone modifications
Annotation Category
2
Genetic variant effects
1
Gene expression levels
Annotation type Category
1
ATAC-seq
1
DNase-seq
1
RNA-seq
Available data
2
bed bed3+
1
tsv
File set status
3
released
Genome assembly (visualization)
2
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
4
right atrium auricular region
3
coronary artery
3
heart
3
heart left ventricle
2
heart right ventricle
2
left cardiac atrium
2
smooth muscle cell of the coronary artery
1
aortic valve
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
left ventricle myocardium
1
mitral valve
1
pulmonary valve
1
right cardiac atrium
1
tricuspid valve
Organ
3
heart
Life stage
2
adult
Date released
2
May, 2020
1
February, 2020
Software used
2
deltasvm
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
relevant_life_stage!
fetal
Showing 3 of 3 results
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FileSet
DSR691DGU
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart left ventricle ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR714XJR
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart left ventricle fetal DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR441UPN
released
Annotation file set
: Gene expression levels of heart left ventricle from RNA-seq (ENCODE)
Lab:
AMP-T2D consortium
Project:
AMP