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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
16
chromatin state
14
target gene predictions
10
accessible chromatin
5
gene expression
2
differential activity
2
histone modifications
2
variant allelic effects
1
binding sites
Annotation Category
5
Gene expression levels
Annotation type Category
RNA-seq
3
single cell RNA-seq
2
scRNA-seq
Available data
5
tsv
File set status
5
released
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
15
epithelial cell of proximal tubule
13
glomerular endothelial cell
9
extended pluripotent stem (EPS) cells
9
progenitor cell of endocrine pancreas
7
endothelial cell
7
kidney loop of Henle thin ascending limb epithelial cell
6
kidney interstitial cell
6
pancreatic ductal cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
4
glomerular visceral epithelial cell
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
mesangial cell
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
B Cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Fibroblast
3
Glomerular Capillary Endothelial Cell
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
T Cell
3
Transitional Principal-Intercalated Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
adult endothelial progenitor cell
3
hepatocyte
3
hepatocyte(AFP)
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney resident macrophage
3
nephron progenitor
3
pancreatic acinar cell
3
pancreatic beta cell
3
pancreatic delta cell
2
Kupffer cell
2
S-shaped body
2
cardiomyocytes (cardiac muscle cell)
2
gamma-delta T cell
2
kidney inner medulla collecting duct intercalated cell
2
kidney loop of Henle descending limb epithelial cell
2
leukocyte
2
macrophage
2
natural killer cell
2
pancreatic alpha cell
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
renal vesicle
2
skeletal muscle fiber
2
vascular associated smooth muscle cell
1
B-1 B cell
1
B-2 B cell
1
CD8-positive, alpha-beta T cell
1
Schwann cell
1
T-helper 17 cell
1
activated pancreatic stellate cell
1
adipocyte
1
adipose tissue
1
alpha-beta T cell
1
alternatively activated macrophage
1
aorta
1
aortic valve
1
bone tissue
1
cholangiocyte
1
cytotoxic T cell
1
dendritic cell
1
effector CD8-positive, alpha-beta T cell
1
epithelial cell of distal tubule
1
erythroid lineage cell
1
glial cell
1
heart
1
heart right ventricle
1
hepatic stellate cell
1
inflammatory macrophage
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
left cardiac atrium
1
mast cell
1
mature B cell
1
mesenchymal cell
1
mesenchymal stem cell
1
meso-epithelial cell
1
mitral valve
1
neural cell
1
pancreatic MUC5B+ductal cell
1
pancreatic alpha+beta cell
1
pancreatic cell
1
pancreatic cycling alpha cell
1
pancreatic endothelial cell
1
pancreatic epsilon cell
1
pancreatic gamma+epsilon cell
1
pancreatic macrophage cell
1
pancreatic mast cell
1
plasma cell
1
proximal tubule
1
pulmonary valve
1
quiescent pancreatic stellate cell
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal connecting tubule
1
renal principal cell
1
right cardiac atrium
1
skeletal muscle satellite cell
1
smooth muscle cell
1
tricuspid valve
1
type I muscle cell
1
type II muscle cell
1
ureteric bud
Disease term
1
acute kidney failure
1
chronic kidney disease
Organ
5
epithelium
2
kidney
Life stage
3
adult
2
fetal
Date released
3
September, 2023
2
February, 2021
Software used
5
r
Lab
3
KPMP
2
AMP-T2D consortium
Project
3
KPMP
2
AMP
RFA
3
KPMP
2
AMP
annotation_type_category!
RNA-seq
Showing 5 of 5 results
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Download
FileSet
DSR050GZI
released
Annotation file set
: Gene expression annotation of Cycling Epithelial Cell of healthy individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR375WGZ
released
Annotation file set
: Gene expression annotation of Cycling Epithelial Cell of CKD individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR676FFG
released
Annotation file set
: Gene expression annotation of Cycling Epithelial Cell of AKI individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR678BZG
released
Annotation file set
: Gene expression levels (pseudobulks UMIs) of SSBpod from GSE114530 scRNAseq fetal kidney
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR457YOB
released
Annotation file set
: Gene expression levels (pseudobulks UMIs) of SSBmd from GSE114530 scRNAseq fetal kidney
Lab:
AMP-T2D consortium
Project:
AMP