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Schema
Citing CMDGA
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Annotation type
4
accessible chromatin
1
gene expression
1
target gene predictions
Annotation Category
1
Gene expression levels
Annotation type Category
1
scRNA-seq
File set status
1
released
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
16
epithelial cell of proximal tubule
15
monocyte
14
glomerular endothelial cell
11
cardiomyocytes
11
islet of Langerhans
10
endothelial cell
9
induced pluripotent stem cell
8
EndoC_BH1
8
H1-hESC
8
hepatocyte
7
T-helper 1 cell
7
T-helper 17 cell
7
kidney
7
kidney loop of Henle thin ascending limb epithelial cell
7
neural progenitor cell
7
regulatory T cell
6
kidney interstitial cell
5
glomerular visceral epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
5
subcutaneous adipose tissue
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
gamma-delta T cell
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
nephron progenitor
3
CD8-positive, alpha-beta T cell
3
S-shaped body
3
T-helper 2 cell
3
adipose tissue
3
adult endothelial progenitor cell
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
heart
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
memory B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
2
B cell
2
Kupffer cell
2
T follicular helper cell
2
adipocyte
2
body of pancreas
2
cerebellum
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
frontal cortex
2
kidney inner medulla collecting duct intercalated cell
2
leukocyte
2
macrophage
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
naive B cel
2
natural killer cell
2
omental fat pad
2
osteoblast
2
pancreatic acinar cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic delta cell
2
pancreatic ductal cell
2
pancreatic polypeptide-secreting cell
2
renal vesicle
2
right atrium auricular region
2
skeletal muscle fiber
2
skeletal muscle satellite cell
2
smooth muscle cell
2
smooth muscle cell of the coronary artery
2
tibial nerve
2
vascular associated smooth muscle cell
2
visceral abdominal adipose tissue
1
Ammon's horn
1
B-1 B cell
1
B-1a B cell
1
B-2 B cell
1
C1 segment of cervical spinal cord
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
Schwann cell
1
activated pancreatic stellate cell
1
adrenal gland
1
alpha-beta T cell
1
alternatively activated macrophage
1
amygdala
1
anterior cingulate cortex
1
aorta
1
aortic valve
1
ascending aorta
1
astrocyte
1
bladder
1
brain
1
breast - mammary tissue
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
cardiac ventricle fibroblast
1
caudate nucleus
1
cells - EBV-transformed lymphocytes
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
cerebellum (Hemisphere)
1
cervix - ectocervix
1
cervix - endocervix
1
cholangiocyte
1
colon - sigmoid
1
colon - transverse
1
coronary artery
1
cytotoxic T cell
1
dendritic cell
1
diencephalon
1
dorsolateral prefrontal cortex
1
effector CD8-positive, alpha-beta T cell
1
effector memory CD4-positive, alpha-beta T cell
1
embryonic stem cell
1
endothelial cell of coronary artery
1
epithelial cell of distal tubule
1
erythroid lineage cell
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
excitatory neuron
1
fallopian tube
1
gastrocnemius medialis(Muscle - Skeletal)
1
glial cell
1
heart left ventricle
1
heart right ventricle
1
hematopoietic multipotent progenitor cell
1
hepatic stellate cell
1
hippocampal neuron
1
hypothalamus
1
inflammatory macrophage
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
kidney - cortex
1
kidney - medulla
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney tubule cell
1
left cardiac atrium
1
left ventricle myocardium
1
liver
1
lower motor neuron
1
lung
1
mast cell
1
mature B cell
1
mesenchymal cell
1
mesenchymal stem cell
1
mesenchymal stem cell of adipose
1
meso-epithelial cell
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
metanephros
1
minor salivary gland
1
mitral valve
1
myeloid dendritic cell
1
naive B cell
1
naive regulatory T cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
neural cell
1
nucleus accumbens
1
occipital lobe
1
ovary
1
pancreatic cell
1
pancreatic epsilon cell
1
pancreatic stellate cell
1
parietal lobe
1
pericardium fibroblast
1
pituitary
1
plasma cell
1
prostate
1
proximal tubule
1
pulmonary valve
1
putamen
1
quiescent pancreatic stellate cell
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal connecting tubule
1
renal cortical epithelial cell
1
renal principal cell
1
retina
1
right cardiac atrium
1
right lobe of liver
1
skeletal muscle myoblast
1
skeletal muscle tissue
Organ
1
connective tissue
1
pancreas
Date released
1
August, 2018
March, 2023
Software used
1
r
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type_category!
single cell RNA-seq
month_released!
March, 2023
software_used.software.name!
salmon
Showing 1 of 1 results
table-tab-icon
matrix-icon
FileSet
TSTSR656WJC
released
Annotation file set
: pancreatic stellate cell TPM gene expreassion matrix and statistic summary from scRNA-seq publications for non-diabetic adults
Lab:
AMP-T2D consortium
Project:
AMP