Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
30
histone modifications
25
target gene predictions
22
chromatin state
19
candidate regulatory elements
10
accessible chromatin
5
gene expression
2
variant allelic effects
Annotation Category
5
Gene expression levels
Annotation type Category
3
RNA-seq
2
scRNA-seq
Available data
5
tsv
1
txt
File set status
5
released
Organism
5
Homo sapiens
Biosample type
3
primary cell
2
tissue
Biosample term
15
monocyte
10
hepatocyte
9
extended pluripotent stem (EPS) cells
9
progenitor cell of endocrine pancreas
8
EndoC_BH1
8
H1-hESC
7
T-helper 1 cell
7
T-helper 17 cell
7
neural progenitor cell
7
regulatory T cell
6
endothelial cell
6
pancreatic ductal cell
5
islet of Langerhans
4
endothelial cell of hepatic sinusoid
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
B Cell
3
CD8-positive, alpha-beta T cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Glomerular Capillary Endothelial Cell
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
T Cell
3
T-helper 2 cell
3
Transitional Principal-Intercalated Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
hepatocyte(AFP)
3
memory B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
2
B cell
2
T follicular helper cell
2
body of pancreas
2
cardiomyocytes (cardiac muscle cell)
2
cerebellum
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
epithelial cell of proximal tubule
2
frontal cortex
2
gamma-delta T cell
2
glomerular endothelial cell
2
heart
2
macrophage
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
naive B cel
2
pancreatic polypeptide-secreting cell
2
right atrium auricular region
2
skeletal muscle fiber
2
skeletal muscle satellite cell
2
smooth muscle cell
2
tibial nerve
1
Ammon's horn
1
B-1 B cell
1
B-1a B cell
1
B-2 B cell
1
C1 segment of cervical spinal cord
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
Schwann cell
1
adrenal gland
1
alternatively activated macrophage
1
amygdala
1
anterior cingulate cortex
1
aorta
1
aortic valve
1
astrocyte
1
bladder
1
brain
1
breast - mammary tissue
1
cardiac muscle cell (pacemaker cell)
1
cardiac precursors (cardiac muscle cell)
1
caudate nucleus
1
cells - EBV-transformed lymphocytes
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
cerebellum (Hemisphere)
1
cervix - ectocervix
1
cervix - endocervix
1
colon - sigmoid
1
colon - transverse
1
coronary artery
1
cytotoxic T cell
1
dendritic cell
1
diencephalon
1
effector CD8-positive, alpha-beta T cell
1
effector memory CD4-positive, alpha-beta T cell
1
embryonic stem cell
1
endothelial cell of coronary artery
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
excitatory neuron
1
fallopian tube
1
gastrocnemius medialis(Muscle - Skeletal)
1
glial cell
1
glomerular visceral epithelial cell
1
heart left ventricle
1
heart right ventricle
1
hematopoietic multipotent progenitor cell
1
hippocampal neuron
1
hypothalamus
1
inflammatory macrophage
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
kidney - cortex
1
kidney - medulla
1
kidney connecting tubule epithelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney tubule cell
1
left cardiac atrium
1
left ventricle myocardium
1
leukocyte
1
liver
1
lower motor neuron
1
lung
1
mast cell
1
mesenchymal cell
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
metanephros
1
minor salivary gland
1
mitral valve
1
myeloid dendritic cell
1
naive B cell
1
naive regulatory T cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
natural killer cell
1
neural cell
1
nucleus accumbens
1
occipital lobe
1
ovary
1
pancreatic MUC5B+ductal cell
1
pancreatic alpha+beta cell
1
pancreatic cell
1
pancreatic cycling alpha cell
1
pancreatic endothelial cell
1
pancreatic epsilon cell
1
pancreatic gamma+epsilon cell
1
pancreatic macrophage cell
1
pancreatic mast cell
Organ
2
heart
Life stage
1
adult
1
embryonic
1
fetal
Date released
2
August, 2021
2
May, 2021
1
February, 2020
February, 2021
Software used
5
r
1
seurat
Lab
4
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
5
AMP
RFA
4
AMP
1
AMP2
month_released!
February, 2021
organ_slims!
connective tissue
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR321UPS
released
Annotation file set
: Gene expression annotation of heart left ventricle from single-cell transcriptome analysis map the developmental track of the human heart
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR072FLD
released
Annotation file set
: GSE118165 gene expression annotation of normal CD8-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR579KZW
released
Annotation file set
: GSE118165 gene expression annotation of LPS-stimulated CD8-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR512ARP
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for CD8-positive, alpha-beta T cell
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR670YAY
released
Annotation file set
: Gene expression levels of Heart fetal from RNA-seq (GSE63634) + RNA-seq (ENCODE) + RNA-seq (GSE106690)
Lab:
AMP-T2D consortium
Project:
AMP