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Annotation type
30
histone modifications
18
accessible chromatin
10
target gene predictions
9
candidate regulatory elements
3
chromatin state
3
gene expression
1
variant allelic effects
Annotation Category
3
Gene expression levels
Annotation type Category
1
RNA-seq
1
scRNA-seq
1
snRNA-seq
Available data
tsv
1
txt
File set status
3
released
Genome assembly (visualization)
1
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
4
hepatocyte
2
islet of Langerhans
2
skeletal muscle fiber
2
skeletal muscle satellite cell
1
adipocyte
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell
1
endothelial cell of coronary artery
1
epithelial cell of proximal tubule
1
glial cell
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
leukocyte
1
mesangial cell
1
mesenchymal cell
1
mesenchymal stem cell
1
mesenchymal stem cell of adipose
1
neural cell
1
pancreatic acinar cell
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
pericardium fibroblast
1
renal cortical epithelial cell
1
skeletal muscle myoblast
1
smooth muscle cell
1
smooth muscle cell of the coronary artery
1
type I muscle cell
1
type II muscle cell
0
CD8-positive, alpha-beta T cell
Organ
2
musculature of body
1
epithelium
1
pancreas
Life stage
1
adult
Date released
1
August, 2018
1
February, 2020
1
February, 2024
Software used
3
r
1
deeptools
1
samtools
1
umitools
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
AMP
RFA
2
AMP
1
AMP2
biosample_term_name!
pancreatic alpha cell
files.file_type!
tsv
Showing 3 of 3 results
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FileSet
DSR919OZT
released
Annotation file set
: Cell type gene expression mean TPM and bw of skeletal muscle satellite cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR147UBG
released
Annotation file set
: Gene expression levels of Skeletal muscle satellite cell from RNA-seq (ENCODE)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR355AID
released
Annotation file set
: pancreatic beta cell TPM gene expreassion matrix and statistic summary from scRNA-seq publications for non-diabetic adults
Lab:
AMP-T2D consortium
Project:
AMP