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Schema
Citing CMDGA
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Annotation type
4
gene expression
2
accessible chromatin
1
variant allelic effects
Annotation Category
4
Gene expression levels
Annotation type Category
3
single cell RNA-seq
1
snRNA-seq
Available data
3
csv
3
tsv
File set status
4
released
Genome assembly (visualization)
1
hg19
Organism
4
Homo sapiens
Biosample type
3
in vitro differentiated cells
1
primary cell
Biosample term
9
extended pluripotent stem (EPS) cells
9
progenitor cell of endocrine pancreas
5
T-helper 1 cell
5
hepatocyte
5
regulatory T cell
4
T-helper 17 cell
4
endothelial cell of hepatic sinusoid
3
hepatocyte(AFP)
3
pancreatic ductal cell
2
skeletal muscle fiber
1
B-1a B cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
T-helper 2 cell
1
adipocyte
1
astrocyte
central memory CD4-positive, alpha-beta T cell
1
central memory CD8-positive, alpha-beta T cell
1
effector memory CD4-positive, alpha-beta T cell
1
effector memory CD8-positive, alpha-beta T cell
1
endothelial cell
1
excitatory neuron
1
glial cell
1
hippocampal neuron
1
leukocyte
1
lower motor neuron
1
memory B cell
1
mesenchymal stem cell
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
neural cell
1
skeletal muscle satellite cell
1
smooth muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
3
epithelium
3
liver
1
connective tissue
Life stage
3
unknown
Date released
4
February, 2024
1
February, 2021
1
May, 2021
Software used
4
r
1
deeptools
1
samtools
1
umitools
Lab
3
AMP-T2D consortium
1
Stephen Parker, UMich
Project
4
AMP
RFA
3
AMP
1
AMP2
biosample_term_name!
central memory CD4-positive, alpha-beta T cell
Showing 4 of 4 results
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Download
FileSet
DSR129ATN
released
Annotation file set
: Gene expression annotaion of liver cell in phase S from single cell transcriptome profiling of hESC-derived pancreatic progenitors
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR572UJX
released
Annotation file set
: Gene expression annotaion of liver cell in phase G2M from single cell transcriptome profiling of hESC-derived pancreatic progenitors
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR437EKE
released
Annotation file set
: Gene expression annotaion of liver cell in phase G1 from single cell transcriptome profiling of hESC-derived pancreatic progenitors
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR143RUO
released
Annotation file set
: Cell type gene expression mean TPM and bw of adipocyte from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP