Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
40
candidate regulatory elements
26
chromatin state
21
target gene predictions
11
accessible chromatin
3
binding sites
3
gene expression
3
histone modifications
3
variant allelic effects
Annotation Category
3
Gene expression levels
Annotation type Category
1
RNA-seq
1
scRNA-seq
1
snRNA-seq
Available data
2
tsv
File set status
3
released
Genome assembly (visualization)
1
hg19
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Biosample term
11
cardiomyocytes
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
8
H1-hESC
7
kidney
7
neural progenitor cell
6
islet of Langerhans
5
pancreatic ductal cell
4
cardiac precursors (cardiac muscle cell)
4
nephron progenitor
3
S-shaped body
3
cardiomyocytes (cardiac muscle cell)
3
hepatocyte(AFP)
3
kidney interstitial cell
2
endothelial cell
2
heart
2
leukocyte
2
mesangial cell
2
pancreatic acinar cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic delta cell
2
pancreatic stellate cell
2
renal vesicle
2
skeletal muscle fiber
1
B-1a B cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
adipocyte
1
aorta
1
aortic valve
1
astrocyte
1
brain
1
cardiac atrium fibroblast
1
central memory CD4-positive, alpha-beta T cell
1
central memory CD8-positive, alpha-beta T cell
1
cerebellum
1
diencephalon
1
effector memory CD4-positive, alpha-beta T cell
1
effector memory CD8-positive, alpha-beta T cell
1
epithelial cell of distal tubule
1
excitatory neuron
1
frontal cortex
1
glial cell
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart right ventricle
1
hippocampal neuron
1
kidney epithelial cell
1
left cardiac atrium
1
liver
1
lower motor neuron
1
memory B cell
1
mesenchymal cell
1
mesenchymal stem cell
1
meso-epithelial cell
1
metanephros
1
mitral valve
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
neural cell
1
occipital lobe
1
osteoblast
1
pancreatic MUC5B+ductal cell
1
pancreatic alpha+beta cell
1
pancreatic cell
1
pancreatic cycling alpha cell
1
pancreatic endothelial cell
1
pancreatic gamma+epsilon cell
1
pancreatic macrophage cell
1
pancreatic mast cell
1
pancreatic polypeptide-secreting cell
1
parietal lobe
1
pericardium fibroblast
1
proximal tubule
1
pulmonary valve
1
renal connecting tubule
1
right cardiac atrium
1
skeletal muscle satellite cell
1
skeletal muscle tissue
1
smooth muscle cell
1
temporal lobe
1
tricuspid valve
1
type I muscle cell
1
type II muscle cell
1
ureteric bud
Organ
2
heart
1
connective tissue
Life stage
adult
1
embryonic
1
fetal
Date released
1
August, 2021
1
February, 2020
1
February, 2024
May, 2021
Software used
3
r
1
deeptools
1
samtools
1
umitools
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
AMP
RFA
2
AMP
1
AMP2
month_released!
May, 2021
relevant_life_stage!
adult
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR321UPS
released
Annotation file set
: Gene expression annotation of heart left ventricle from single-cell transcriptome analysis map the developmental track of the human heart
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR143RUO
released
Annotation file set
: Cell type gene expression mean TPM and bw of adipocyte from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR670YAY
released
Annotation file set
: Gene expression levels of Heart fetal from RNA-seq (GSE63634) + RNA-seq (ENCODE) + RNA-seq (GSE106690)
Lab:
AMP-T2D consortium
Project:
AMP