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Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
19
target gene predictions
18
chromatin state
10
accessible chromatin
3
differential activity
3
gene expression
3
histone modifications
2
eQTL
2
variant allelic effects
1
binding sites
Annotation Category
3
Gene expression levels
Annotation type Category
2
scRNA-seq
1
RNA-seq
Available data
2
tsv
File set status
3
released
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
tissue
Biosample term
13
hepatocyte
11
cardiomyocytes
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
islet of Langerhans
9
progenitor cell of endocrine pancreas
8
H1-hESC
8
endothelial cell
7
neural progenitor cell
5
T-helper 1 cell
5
T-helper 17 cell
5
mesangial cell
5
pancreatic ductal cell
5
regulatory T cell
5
subcutaneous adipose tissue
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
endothelial cell of hepatic sinusoid
4
nephron progenitor
3
Adaptive / Maladaptive / Repairing Fibroblast
3
B Cell
3
Classical Dendritic Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Fibroblast
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
Mast Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Regulatory T Cell
3
T Cell
3
Transitional Principal-Intercalated Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
adipose tissue
3
adult endothelial progenitor cell
3
cardiomyocytes (cardiac muscle cell)
3
heart
3
hepatocyte(AFP)
2
Kupffer cell
2
adipocyte
2
body of pancreas
2
cerebellum
2
frontal cortex
2
gamma-delta T cell
2
leukocyte
2
natural killer cell
2
omental fat pad
2
osteoblast
2
pancreatic acinar cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic delta cell
2
pancreatic stellate cell
2
renal vesicle
2
right atrium auricular region
2
skeletal muscle fiber
2
skeletal muscle satellite cell
2
smooth muscle cell of the coronary artery
2
tibial nerve
2
vascular associated smooth muscle cell
2
visceral abdominal adipose tissue
1
Ammon's horn
1
B-1 B cell
1
B-1a B cell
1
B-2 B cell
1
C1 segment of cervical spinal cord
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD8-positive, alpha-beta T cell
1
T-helper 2 cell
1
adrenal gland
1
alpha-beta T cell
1
alternatively activated macrophage
1
amygdala
1
anterior cingulate cortex
1
aorta
1
aortic valve
1
ascending aorta
1
astrocyte
1
bladder
1
brain
1
breast - mammary tissue
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
caudate nucleus
1
cells - EBV-transformed lymphocytes
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
central memory CD8-positive, alpha-beta T cell
1
cerebellum (Hemisphere)
1
cervix - ectocervix
1
cervix - endocervix
1
cholangiocyte
1
colon - sigmoid
1
colon - transverse
1
coronary artery
1
dendritic cell
1
diencephalon
1
dorsolateral prefrontal cortex
1
effector CD8-positive, alpha-beta T cell
1
effector memory CD4-positive, alpha-beta T cell
1
effector memory CD8-positive, alpha-beta T cell
1
endothelial cell of coronary artery
1
erythroid lineage cell
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
excitatory neuron
1
fallopian tube
1
gastrocnemius medialis(Muscle - Skeletal)
1
glial cell
1
heart left ventricle
1
heart right ventricle
1
hepatic stellate cell
1
hippocampal neuron
1
hypothalamus
1
inflammatory macrophage
1
left cardiac atrium
1
left ventricle myocardium
1
liver
1
lower motor neuron
1
lung
1
macrophage
1
mature B cell
1
memory B cell
1
mesenchymal cell
1
mesenchymal stem cell
1
mesenchymal stem cell of adipose
1
meso-epithelial cell
1
minor salivary gland
1
mitral valve
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
neural cell
1
nucleus accumbens
1
occipital lobe
1
ovary
1
pancreatic MUC5B+ductal cell
1
pancreatic alpha+beta cell
1
pancreatic cell
1
pancreatic cycling alpha cell
1
pancreatic endothelial cell
1
pancreatic gamma+epsilon cell
1
pancreatic macrophage cell
1
pancreatic mast cell
1
pancreatic polypeptide-secreting cell
1
parietal lobe
1
pericardium fibroblast
1
pituitary
1
plasma cell
1
prostate
1
pulmonary valve
1
putamen
1
retina
1
right cardiac atrium
1
right lobe of liver
1
skeletal muscle myoblast
1
skeletal muscle tissue
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
small intestine - terminal Ileum
1
smooth muscle cell
1
spleen
1
stomach
1
substantia nigra
1
temporal lobe
1
testis
1
thyroid
1
tibial artery
1
tricuspid valve
1
type I muscle cell
1
type II muscle cell
1
uterus
1
vagina
1
whole blood
Organ
2
epithelium
2
pancreas
1
brain
Life stage
1
fetal
Date released
May, 2021
1
August, 2018
1
February, 2020
1
March, 2023
Software used
3
r
Lab
2
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
3
AMP
RFA
3
AMP
month_released!
May, 2021
organ_slims!
kidney
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR926HPD
released
Annotation file set
: Gene expression annotation of pancreatic beta from single-cell transcriptome analysis
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR267EUN
released
Annotation file set
: Gene expression levels of Brain fetal from RNA-seq (GSE63634)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR355AID
released
Annotation file set
: pancreatic beta cell TPM gene expreassion matrix and statistic summary from scRNA-seq publications for non-diabetic adults
Lab:
AMP-T2D consortium
Project:
AMP