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Schema
Citing CMDGA
Clear Filters
Annotation type
6
gene expression
2
accessible chromatin
Annotation Category
6
Gene expression levels
Annotation type Category
5
scRNA-seq
1
RNA-seq
Available data
6
tsv
3
txt
File set status
6
released
Organism
6
Homo sapiens
Biosample type
6
primary cell
Biosample term
16
epithelial cell of proximal tubule
13
glomerular endothelial cell
13
hepatocyte
7
kidney loop of Henle thin ascending limb epithelial cell
6
endothelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
regulatory T cell
5
subcutaneous adipose tissue
4
T-helper 1 cell
4
T-helper 17 cell
4
bone tissue
4
endothelial cell of hepatic sinusoid
glomerular visceral epithelial cell
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
B Cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Fibroblast
3
Glomerular Capillary Endothelial Cell
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
T Cell
3
Transitional Principal-Intercalated Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
adipose tissue
3
adult endothelial progenitor cell
3
islet of Langerhans
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney interstitial cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
mesangial cell
2
Kupffer cell
2
body of pancreas
2
gamma-delta T cell
2
kidney inner medulla collecting duct intercalated cell
2
natural killer cell
2
omental fat pad
2
right atrium auricular region
2
smooth muscle cell of the coronary artery
2
tibial nerve
2
vascular associated smooth muscle cell
2
visceral abdominal adipose tissue
1
Ammon's horn
1
B-1 B cell
1
B-2 B cell
1
C1 segment of cervical spinal cord
1
CD8-positive, alpha-beta T cell
1
adipocyte
1
adrenal gland
1
alpha-beta T cell
1
alternatively activated macrophage
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
bladder
1
breast - mammary tissue
1
cardiac ventricle fibroblast
1
caudate nucleus
1
cells - EBV-transformed lymphocytes
1
cells - cultured fibroblasts
1
cerebellum
1
cerebellum (Hemisphere)
1
cervix - ectocervix
1
cervix - endocervix
1
cholangiocyte
1
colon - sigmoid
1
colon - transverse
1
coronary artery
1
dendritic cell
1
dorsolateral prefrontal cortex
1
effector CD8-positive, alpha-beta T cell
1
endothelial cell of coronary artery
1
erythroid lineage cell
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
fallopian tube
1
frontal cortex
1
gastrocnemius medialis(Muscle - Skeletal)
1
heart
1
heart left ventricle
hepatic stellate cell
1
hypothalamus
1
inflammatory macrophage
1
kidney - cortex
1
kidney - medulla
1
kidney glomerular epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney tubule cell
1
left ventricle myocardium
1
lung
1
macrophage
1
mature B cell
1
mesenchymal stem cell of adipose
1
minor salivary gland
1
nucleus accumbens
1
osteoblast
1
ovary
1
pituitary
1
plasma cell
1
prostate
1
putamen
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal cortical epithelial cell
1
renal principal cell
1
retina
1
right lobe of liver
1
skeletal muscle myoblast
1
skeletal muscle satellite cell
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
small intestine - terminal Ileum
1
spleen
1
stomach
1
substantia nigra
1
testis
1
thyroid
1
tibial artery
1
uterus
1
vagina
1
whole blood
Organ
6
epithelium
Life stage
6
adult
1
fetal
Date released
3
August, 2021
3
February, 2021
May, 2021
Software used
6
r
3
seurat
Lab
3
AMP-T2D consortium
3
Katalin Susztak, Upenn
Project
6
AMP
RFA
3
AMP
3
AMP2
biosample_term_name!
glomerular visceral epithelial cell
hepatic stellate cell
month_released!
May, 2021
Showing 6 of 6 results
table-tab-icon
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Download
FileSet
DSR239ZHY
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for endothelial cell cluster 3
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR555DIA
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for endothelial cell cluster 2
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR901DMS
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for endothelial cell cluster 1
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR661VCO
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of liver Portal Endothelial Cells from GSE115469 scRNA-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR365BTF
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of liver Central Venous LSECs from GSE115469 scRNA-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR308YEA
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of liver Peripotal LSECs from GSE115469 scRNA-seq
Lab:
AMP-T2D consortium
Project:
AMP