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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
target gene predictions
0
histone modifications
Annotation Category
2
Target gene links
Annotation type Category
1
ATAC-seq
1
snATAC-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
9
pericyte cell
7
endothelial cell
6
smooth muscle cell
4
fibroblast
3
colon epithelial cell
3
pancreatic delta cell
2
CD8-positive, alpha-beta T cell
2
astrocyte
2
blood vessel smooth muscle cell
2
cortical cell of adrenal gland
2
enteric smooth muscle cell
2
gabaergic neuron
2
glutamatergic neuron
2
keratinocyte
2
luminal epithelial cell of mammary gland
2
macrophage
2
memory B cell
2
pancreatic A cell
2
pancreatic acinar cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic ductal cell
2
smooth muscle cell of the esophagus
2
type B pancreatic cell
2
type II pneumocyte
1
CD4-positive, alpha-beta T cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
alveolar macrophage
1
basal cell
1
basal cell of epidermis
1
cardiac endothelial cell
1
ciliated cell
1
club cell
1
colon goblet cell
1
conventional dendritic cell
1
eccrine cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
1
enteric neuron
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
fat cell
1
fibroblast of cardiac tissue
1
foveolar cell of stomach
1
granular cell of epidermis
1
hepatocyte
1
intestinal tuft cell
1
luteal cell
1
mammary gland epithelial cell
1
mast cell
1
mature NK T cell
1
megakaryocyte
1
melanocyte
1
mesothelial cell
1
microglial cell
1
monocyte
1
myoepithelial cell
1
naive B cell
1
naive t cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
natural killer cell mediated cytotoxicity
1
non keratinizing barrier epithelial cell
1
non-classical monocyte
1
oligodendrocyte
1
oligodendrocyte precursor cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
paneth cell
1
parietal cell
1
peptic cell
1
plasma cell
1
plasmacytoid dendritic cell
1
regular atrial cardiac myocyte
1
regulatory T cell
1
respiratory goblet cell
1
schwann cell
1
skeletal muscle fibroblast
1
skeletal muscle satellite cell
1
skin fibroblast
1
small intestine goblet cell
1
stellate neuron
1
stomach neuroendocrine cell
1
stromal cell
1
thyroid follicular cell
1
type I cell of adrenal cortex
1
type I muscle cell
1
type I pneumocyte
1
type II cell of adrenal cortex
1
type II muscle cell
1
uterine smooth muscle cell
1
ventricular cardiac muscle cell
0
Adipose stromal cell
Date released
1
January, 2021
1
November, 2021
Software used
1
abc
1
cicero
Lab
1
Bing Ren, UCSD
1
Kyle Gaulton, UCSD
Project
AMP
1
ENCODE
1
T1D
RFA
1
ENCODE3
1
T1D
award.project!
AMP
Showing 2 of 2 results
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Download
FileSet
DSR550FOW
released
Annotation file set
: Target gene predictions of T lymphocyte 2 (CD4+) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR158NKH
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of classical_monocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D