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Schema
Citing CMDGA
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Annotation type
2
candidate regulatory elements
2
target gene predictions
1
accessible chromatin
1
binding sites
1
chromatin state
1
histone modifications
Annotation Category
2
Target gene links
1
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
15
large intestine
7
sigmoid colon
5
transverse colon
4
colon epithelial cell
3
HCT116
3
HT-29
3
colonic mucosa
2
SW480
2
mucosa of rectum
2
muscle layer of colon
1
HCT-116 cell
1
RKO
1
rectum smooth muscle tissue
Disease term
1
colorectal adenocarcinoma
Organ
3
intestine
3
large intestine
Life stage
1
adult
Date released
1
February, 2021
1
May, 2021
1
September, 2022
Software used
1
abc
1
macs
1
r
Lab
2
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
3
AMP
RFA
3
AMP
month_released!
January, 2021
Showing 3 of 3 results
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Download
FileSet
DSR883VDG
released
Annotation file set
: Target gene predictions for BSS00708 HT-29 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR582VBD
released
Annotation file set
: Histone modifications annotation for Digestive tract HT-29 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR797VJC
released
Annotation file set
: enhancer-gene predicton of HT29 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP