Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
6
accessible chromatin
5
chromatin state
5
target gene predictions
2
candidate regulatory elements
1
binding sites
1
gene expression
1
histone modifications
1
variant allelic effects
Annotation Category
5
Target gene links
1
cis-regulatory elements
Annotation type Category
5
DNase-seq
4
ATAC-seq
4
H3K27ac ChIP-Seq
2
ChIP-seq
Available data
6
bed bed3+
File set status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
6
in vitro differentiated cells
Biosample term
52
HeLa-S3
40
H1-hESC
23
CD8-positive, alpha-beta T cell
21
neural progenitor cell
20
heart
19
HFFc6
19
brain
18
K562
17
placenta
17
stomach
16
CD14-positive monocyte
16
lung
16
muscle of arm
15
large intestine
15
small intestine
15
thymus
14
kidney
14
muscle of leg
13
left lung
13
muscle of back
11
adrenal gland
11
breast cancer cell
11
right lung
10
pericyte cell
10
pituitary stalk
10
right kidney
9
gastric cancer cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
9
spinal cord
8
GM12878
8
H9
8
HepG2
8
Rhabdomyosarcoma
8
endothelial cell
8
hepatocyte
8
keratinocyte
8
lymphocyte
8
neuroblastoma cell
8
trophoblast cell
7
B-lymphoblastoid cell line
7
diffuse intrinsic pontine glioma
7
esophageal adenocarcinoma
7
smooth muscle cell
6
B cell
6
CD4-positive, alpha-beta memory T cell
6
Chondroid Chordoma
6
adipocyte
6
dendritic cell
6
fibroblast
6
hESC cell
6
liposarcoma
6
liver
6
neuroblastoma cell line
6
olfactory receptor cell
6
squamous cell lung carcinoma
5
CyT49
5
T-cell acute lymphoblastic leukemia
5
astrocyte
5
fibroblast of cardiac tissue
5
foreskin fibroblast
5
foreskin keratinocyte
5
heart left ventricle
5
macrophage
5
melanoma cell
5
monocyte
5
muscle of trunk
5
osteosarcoma
5
pancreatic ductal cell
4
HUES8
4
Jurkat
4
bronchial epithelial cell
4
cardiac muscle cell
4
chorionic villus
4
colon epithelial cell
4
common myeloid progenitor, CD34-positive
4
endothelial cell of umbilical vein
4
epithelial cell of prostate
4
iPSC derived cell line
4
mammary epithelial cell
4
mesenchymal stem cell
4
mesendoderm
4
natural killer cell
4
neuronal stem cell
4
osteoblast
4
pancreatic acinar cell
4
psoas muscle
4
retina
4
rhabdomyosarcoma cell
4
skin fibroblast
4
spleen
3
22Rv1
3
CD4-positive helper T cell
3
CD4-positive, alpha-beta T cell
3
Ewing sarcoma
3
GM18507
3
H7-hESC
3
IMR-90
3
MCF-7
3
NAMALWA cell
3
PC-9
3
SK-N-DZ
3
SK-N-SH
3
T-helper 17 cell
3
U937
3
acute myeloid leukemia
3
chorion membrane
3
dermis lymphatic vessel endothelial cell
3
diffuse large B-cell lymphoma
3
embryonic stem cell
3
endodermal cell
3
esophageal squamous cell carcinoma
3
fibroblast of dermis
3
fibroblast of lung
3
glioblastoma cell
3
glioma cell
3
heart right ventricle
3
lymphoblast
3
lymphoblastoid cell line
3
mammary gland epithelial cell
3
neurosphere
3
neutrophil
3
ovary
3
pancreas
3
pancreatic A cell
3
pancreatic delta cell
3
pancreatic ductal adenocarcinoma
3
regulatory T cell
3
sigmoid colon
3
skeletal muscle myoblast
3
trophoblast
3
type B pancreatic cell
2
A549
2
A673
2
AG04449 cell
2
AG04450 cell
2
B-lymphocyte
2
BE(2)-C
2
BJ cell
2
BJAB cell
2
CD1c-positive myeloid dendritic cell
2
CD8-positive, alpha-beta memory T cell
2
CMK
2
COLO205
2
EndoC_BH1
2
GM06990
2
GM12864
2
GM12865
2
GM12891
2
GM12892
2
GM18505
2
GM19099
2
GM19193
2
GM19238
2
GM19239
2
GM19240
2
HAP-1
2
HCT-116 cell
2
HCT116
2
HEK293
2
HK-2 cell
2
HS-SY-2 cell
HT-29
2
KARPAS-422 cell
2
LNCAP
2
LoVo cell
2
MCF 10A cell
2
MDA-MB-231 cell
2
MG63
2
MM.1S
2
Mantle cell lymphoma
2
NCCIT cell
2
NT2-D1 cell
2
OCI-LY7
2
Panc1
2
RS4-11 cell
2
Rh-4 cell
2
SK-N-MC
2
T cell
2
T-cell
2
THP-1
2
Th1 cell
2
WERI-Rb-1
2
activated CD4-positive, alpha-beta T cell
2
acute myeloid leukemia cell
2
adipose tissue
blood vessel smooth muscle cell
2
choroid plexus epithelial cell
2
chronic lymphocytic leukemia
2
colon adenocarcinoma
2
colon carcinoma
2
cortical cell of adrenal gland
2
endometriosis
2
enteric smooth muscle cell
2
epithelial ovarian cancer cell
2
erythroblast
2
erythroid progenitor cell
2
esophageal carcinoma
2
eye
Organ
6
connective tissue
Life stage
adult
1
unknown
Date released
4
May, 2021
1
February, 2021
1
September, 2022
Software used
4
abc
1
macs
1
r
Lab
4
Jesse Engreitz, Stanford University
2
AMP-T2D consortium
Project
6
AMP
RFA
6
AMP
biosample_term_name!
HT-29
blood vessel smooth muscle cell
relevant_life_stage!
adult
Showing 6 of 6 results
table-tab-icon
matrix-icon
Download
FileSet
DSR619LYX
released
Annotation file set
: Target gene predictions for BSS00038 adipocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR014GTX
released
Annotation file set
: Histone modifications annotation for Adipocyte Adipocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR039HOA
released
Annotation file set
: enhancer-gene predicton of Adipocyte-Claussnitzer_d14 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR164LWB
released
Annotation file set
: enhancer-gene predicton of Adipocyte-Claussnitzer_d6 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR542JXE
released
Annotation file set
: enhancer-gene predicton of Adipocyte-Claussnitzer_d2 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR941KCA
released
Annotation file set
: enhancer-gene predicton of Adipocyte-Claussnitzer_d0 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP