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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
6
accessible chromatin
5
chromatin state
3
binding sites
2
histone modifications
1
gene expression
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
2
ChIP-seq
1
pCHi-C
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
cell line
Biosample term
89
monocyte
55
HeLa-S3
40
H1-hESC
35
CD8-positive, alpha-beta T cell
24
K562
22
stomach
21
heart
21
neural progenitor cell
20
A549
19
CD14-positive monocyte
19
HFFc6
19
brain
17
adrenal gland
17
lung
17
placenta
17
small intestine
16
kidney
16
muscle of arm
15
large intestine
15
thymus
14
common myeloid progenitor, CD34-positive
14
muscle of leg
13
left lung
13
muscle of back
12
B cell
12
liver
11
breast cancer cell
11
hematopoietic multipotent progenitor cell
11
right lung
10
pericyte cell
10
pituitary stalk
10
right kidney
9
CD4-positive, alpha-beta memory T cell
GM12878
9
gastric cancer cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
9
spinal cord
8
H9
8
HepG2
8
MCF-7
8
Rhabdomyosarcoma
8
adipose tissue
8
endothelial cell
8
heart left ventricle
8
hepatocyte
keratinocyte
8
lymphocyte
8
neuroblastoma cell
8
psoas muscle
7
B-lymphoblastoid cell line
7
CD8-positive, alpha-beta memory T cell
7
adipocyte
7
diffuse intrinsic pontine glioma
7
esophageal adenocarcinoma
7
natural killer cell
7
sigmoid colon
7
spleen
7
trophoblast cell
6
Chondroid Chordoma
6
dendritic cell
6
fibroblast
6
fibroblast of cardiac tissue
6
hESC cell
6
liposarcoma
6
mononuclear cell
6
neuroblastoma cell line
6
olfactory receptor cell
6
ovary
6
pancreas
6
smooth muscle cell
6
squamous cell lung carcinoma
5
CyT49
5
T cell
5
T-cell acute lymphoblastic leukemia
5
astrocyte
5
body of pancreas
5
foreskin fibroblast
5
foreskin keratinocyte
5
gastrocnemius medialis
5
heart right ventricle
5
macrophage
5
mammary gland epithelial cell
5
melanoma cell
5
mesenchymal stem cell
5
muscle of trunk
5
osteosarcoma
5
pancreatic ductal cell
5
regulatory T cell
4
HUES8
4
Jurkat
4
aorta
4
bronchial epithelial cell
cardiac muscle cell
4
caudate nucleus
4
chorionic villus
4
colon epithelial cell
4
endocrine pancreas
4
endothelial cell of umbilical vein
4
epithelial cell of prostate
4
fibroblast of dermis
4
fibroblast of lung
4
iPSC derived cell line
4
layer of hippocampus
4
mammary epithelial cell
4
mesendoderm
4
neuronal stem cell
4
osteoblast
4
pancreatic acinar cell
4
pancreatic delta cell
4
prostate gland
4
retina
4
rhabdomyosarcoma cell
4
skeletal muscle myoblast
4
thyroid gland
4
transverse colon
3
22Rv1
3
CD4-positive helper T cell
3
CD4-positive, alpha-beta T cell
3
Ewing sarcoma
3
GM18507
3
GM19238
3
GM19239
3
GM19240
3
H7-hESC
3
HAP-1
3
HCT116
3
HT-29
3
IMR-90
3
KARPAS-422 cell
3
LoVo cell
3
MM.1S
3
NAMALWA cell
3
OCI-LY7
3
PC-9
3
Peyer's patch
3
SK-N-DZ
3
SK-N-SH
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
U937
3
acute myeloid leukemia
3
breast epithelium
3
cardiomyocytes (cardiac muscle cell)
3
cerebellum
3
chorion membrane
3
colonic mucosa
3
coronary artery
3
dermis lymphatic vessel endothelial cell
3
diffuse large B-cell lymphoma
3
embryonic stem cell
3
endodermal cell
3
endometrium adenocarcinoma
3
esophageal squamous cell carcinoma
3
esophagus
3
glioblastoma cell
3
glioma cell
3
hepatic stellate cell
3
immortal human breast epithelial cell line cell
3
luminal epithelial cell of mammary gland
3
lymphoblast
3
lymphoblastoid cell line
3
naive T cell
3
neurosphere
3
neutrophil
3
pancreatic A cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal adenocarcinoma
3
skeletal muscle tissue
3
skin fibroblast
3
substantia nigra
3
testis
3
upper lobe of left lung
2
A673
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
Ammon's horn
2
B-lymphocyte
2
BE(2)-C
2
BJ cell
2
BJAB cell
2
Brodmann (1909) area 46
2
CD1c-positive myeloid dendritic cell
2
CMK
2
COLO205
2
Caco-2 cell
2
EndoC_BH1
2
GM06990
2
GM12864
2
GM12865
2
GM12875
2
GM12891
2
GM12892
2
GM18505
Date released
2
February, 2021
1
March, 2020
Software used
2
macs
1
nospecificsoft_customcode
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
GM12878
cardiac muscle cell
keratinocyte
Showing 3 of 3 results
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Download
FileSet
DSR927IPU
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell Expanded_potential_stem_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR134CON
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell Embryonic_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR929DUM
released
Annotation file set
: A target gene prediction annotation in Human Human ES Cells of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP