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Schema
Citing CMDGA
Clear Filters
Annotation type
6
accessible chromatin
6
chromatin state
6
target gene predictions
4
candidate regulatory elements
2
gene expression
2
histone modifications
1
binding sites
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
2
ChIP-seq
1
snATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
cell line
1
in vitro differentiated cells
Biosample term
86
monocyte
30
CD8-positive, alpha-beta T cell
16
neural progenitor cell
7
fibroblast
6
hepatocyte
6
neuroblastoma cell line
5
T-cell acute lymphoblastic leukemia
4
brain
4
rhabdomyosarcoma cell
3
endothelial cell
3
enterocyte
3
heart
3
heart left ventricle
3
keratinocyte
3
kidney
3
macrophage
3
mammary epithelial cell
3
myofibroblast cell
3
neuronal stem cell
3
pancreatic ductal adenocarcinoma
3
pancreatic ductal cell
2
cardiac fibroblast
2
muscle of leg
2
B cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
Schwann cell
2
T cell
2
Th1 cell
2
acute myeloid leukemia cell
2
adipocyte
2
basal cell
2
cardiac muscle cell
2
caudate nucleus
2
colon adenocarcinoma
2
coronary artery
2
endometriosis
2
epithelial cell of esophagus
2
erythroid progenitor cell
2
esophageal adenocarcinoma
2
foreskin fibroblast
2
globus pallidus
2
goblet cell
2
hepatic stellate cell
2
islet of Langerhans
2
liver
2
mammary gland epithelial cell
2
mantle cell lymphoma cell
2
mast cell
2
medulloblastoma cell line
2
midbrain
2
natural killer cell
2
occipital lobe
2
osteoblast
2
pancreas
2
pancreatic endocrine cell
2
placenta
2
pre-B acute lymphoblastic leukemia cell
2
preadipocyte
2
prostate gland
2
putamen
2
retina
2
right atrium auricular region
2
skeletal muscle fiber
2
skeletal muscle myoblast
2
smooth muscle cell
2
superior temporal gyrus
2
tibial artery
2
tibial nerve
2
tracheal epithelial cell
2
vascular associated smooth muscle cell
1
brain microvascular endothelial cell
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
retinal pigment epithelial cell
1
Adipose SGBS cell line (adipocyte)
1
Adipose stromal cell
1
B-cell lymphoma cell
1
B-lymphocyte
1
BICR 31
1
Barrett's epithelial cell line
1
Brodmann (1909) area 9
1
CD1c-positive myeloid dendritic cell
1
CD34-positive, CD38-negative hematopoietic stem cell
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
1
CD4-positive helper T cell
1
CD8-Positive T-Lymphocytes
1
Chondroid Chordoma
1
Crypt of Lieberkuhn
1
EAhy 926 cell
1
Heart fetal (cardiac muscle cell)
1
Ishikawa
1
Liver fetal (hepatocyte)
1
Preadipose SGBS cell line (adipocyte)
1
Rhabdoid Tumor of the Kidney
1
Satellite Cells, Skeletal Muscle
1
Stromal Predominant Kidney Wilms Tumor
1
T-cell lymphoma cell
1
T-lymphoma cell line
1
Th17 cell
1
Uveal Melanoma
1
acute myeloid leukemia
1
adipose tissue
1
adipose-derived stem cell
1
alveolar cell type II
1
amygdala
1
anterior parahippocampal gyrus
1
aortic adventitial fibroblast
1
aortic endothelial cell
1
arcuate nucleus of hypothalamus
1
ascending aorta
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
atypical teratoid rhabdoid tumor
1
bed nucleus of stria terminalis
1
body of pancreas
1
bone cell
1
bone marrow cell
1
brain pericyte
1
breast carcinoma
1
bronchial epithelial cell
1
bronchial goblet cell
1
cardiac muscle myoblast
1
cardiac precursors (cardiac muscle cell)
1
cardiogenic mesoderm
1
cardiomyocytes (cardiac muscle cell)
1
cartilage tissue
1
cerebellum
1
cerebellum (Hemisphere)
1
chondroblastoma
1
choroid plexus epithelial cell
chronic lymphocytic leukemia
1
chronic lymphocytic leukemia cell
1
chronic myelomonocytic leukemia
1
circle of Willis
1
claustrum of brain
1
colon carcinoma
1
colonic adenoma cell
1
colonic mucosa
1
colorectal adenocarcinoma
1
colorectal cancer
1
colorectal carcinoma
1
columnar chondrocyte
1
corneal epithelium
1
cortex of kidney
1
cortical cell of adrenal gland
1
dentate nucleus
1
diffuse intrinsic pontine glioma
1
diffuse large B-cell lymphoma
1
dorsal lateral geniculate nucleus
1
dura mater
1
embryonic fibroblast
1
embryonic stem cell
1
endometrial stromal cell
1
endometrial stromal tumor
1
endometrioid carcinoma
1
endometrium cancer
1
endothelial cell of umbilical vein
1
entorhinal cortex
1
ependymoma
1
epidermal stem cell
1
epithelial cell of proximal tubule
1
erythroid cell
1
fibroblast of mammary gland
1
fibroblast of pulmonary artery
1
fibroblast of villous mesenchyme
1
fibroblast-like synoviocyte
1
first pancreatic bud
1
foreskin keratinocyte
1
foreskin melanocyte
1
frontal cortex
1
frontal pole
1
glomerular endothelial cell
1
granulocyte
1
granulosa cell
1
gyrus rectus
1
hESC cell
1
head and neck neoplasia
1
head and neck squamous cell carcinoma
1
head and neck squamous cell carcinoma BICR 16
1
head and neck squamous cell carcinoma BICR 6
1
heart right ventricle
1
hematopoietic multipotent progenitor cell
1
hepatocellular carcinoma
1
hypothalamus
1
iPS DF 4.7 Cell Line
1
intestinal epithelial cell
1
intestinal epithelium
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney epithelium
1
kidney glomerular epithelial cell
1
large intestine
1
layer of hippocampus
1
left cardiac atrium
1
left renal cortex interstitium
1
left renal pelvis
1
leukemic stem cell
1
locus ceruleus
Organ
2
connective tissue
Date released
2
February, 2021
1
February, 2024
Software used
2
macs
1
deltasvm
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Project
3
AMP
RFA
3
AMP
biosample_term_name!
chronic lymphocytic leukemia
biosample_type!
cell line
Showing 3 of 3 results
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Download
FileSet
DSR627JAL
released
Annotation file set
: Histone modifications annotation for Others Bladder_cancer from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR014GTX
released
Annotation file set
: Histone modifications annotation for Adipocyte Adipocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR476AJZ
released
Annotation file set
: Variant allelic effects annotation of Adipocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP