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Schema
Citing CMDGA
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Annotation type
2
accessible chromatin
2
binding sites
2
candidate regulatory elements
1
chromatin state
1
histone modifications
1
target gene predictions
1
variant allelic effects
Annotation Category
1
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
cell line
1
primary cell
Biosample term
4
brain
2
cardiac fibroblast
2
caudate nucleus
2
choroid plexus epithelial cell
2
globus pallidus
2
midbrain
2
putamen
1
brain microvascular endothelial cell
1
BE(2)-C
1
Brodmann (1909) area 9
1
SK-N-DZ
1
SK-N-MC
1
U-87 MG
1
amygdala
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
bed nucleus of stria terminalis
1
bone marrow cell
1
brain pericyte
1
cerebellum
1
cerebellum (Hemisphere)
1
claustrum of brain
1
dentate nucleus
1
dorsal lateral geniculate nucleus
1
dura mater
1
entorhinal cortex
1
frontal cortex
1
frontal pole
1
hypothalamus
1
layer of hippocampus
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
medulla oblongata
1
middle frontal gyrus
1
mononuclear cell of bone marrow
1
myelencephalon
1
nucleus accumbens
1
nucleus of ventral thalamus
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pituitary gland
1
pons
1
pontine tegmentum
1
precentral gyrus
1
prefrontal cortex
1
pulvinar nucleus
1
raphe nuclei
1
red nucleus
1
septal nuclear complex
1
subiculum
1
substantia nigra
1
superior parietal cortex
1
temporal lobe
1
temporal pole
1
thalamic complex
Organ
2
brain
2
epithelium
2
vasculature
0
bone marrow
0
vagina
Date released
1
February, 2021
1
May, 2020
Software used
1
deltasvm
1
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR023RXU
released
Annotation file set
: Histone modifications annotation for Neural HCPEpiC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR492TXW
released
Annotation file set
: Genetic variants with deltaSVM predictions in brain choroid plexus cell DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP