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Citing CMDGA
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Annotation type
1277
target gene predictions
896
chromatin state
825
candidate regulatory elements
815
accessible chromatin
479
gene expression
153
differential activity
148
eQTL
137
histone modifications
123
variant allelic effects
88
binding sites
68
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
Annotation Category
4
Genetic variant effects
Annotation type Category
3
DNA methylation profiling by array assay
1
quantitative proteomics
Available data
3
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
tissue
Biosample term
1
cerebrospinal fluid
1
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
neutrophil
Organ
connective tissue
1
bodily fluid
Life stage
4
adult
Date released
3
May, 2021
1
August, 2021
Software used
3
limix
3
minfi
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
month_released!
February, 2021
organ_slims!
connective tissue
Showing 4 of 4 results
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FileSet
DSR561OLH
released
Annotation file set
: pQTLs from CSF levels of 1,126 proteins in 133 subjects by performing a genome-wide association analysis of 514,227 SNPs
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR135HUG
released
Annotation file set
: methylation quantitative trait loci (meQTLs) from DAN methylation of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 132 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR197ERC
released
Annotation file set
: methylation quantitative trait loci (meQTLs) from DAN methylation of BLUEPRINT epigenome project of human immune cell types (CD16+ neutrophils) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR301CXZ
released
Annotation file set
: methylation quantitative trait loci (meQTLs) from DAN methylation of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 196 individuals.
Lab:
AMP-T2D consortium
Project:
AMP